Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00378 ATGTCTTGGTATACCCAGCAGCCCTATCAGGCTATCACATTGGTCGATGCAGAGTCTAACAAAGAATTGGAACAATGGAATGAAATGCTAAAAAGTGATGCTGTAAAGCTGTGCCAGGAAAACAATTTCAATACAGGATTTTTTGAGGGGAGTGATAATTACTGTGTCATTGATGCTTACGAACTGAAGGTCAGACTCGAGCATATCCTTGAGAGGATTGCATTGATTTCCGAGGCTGCGAATTCAGAGAAGCCATCCCGGATCACAAATAATCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTTTGTACACACTTCAACAATTGGGAGTCACACATATTATGTGTTTGTGTGCGAACGAAATAGGACAGTCAGATTCTCAATTTCCTGATCTATTTGCATACAATAATTTCTCTGTAAGTGACGATGAAGATTCTAACATCAGTAGCATATTTGAAGAAGCTTGTGATCTGATAAGTGATGTTGAAGGAACAGGTCAGAGAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGCGTTACGTTGGTGCTTGCTTACTTAATGCTCAGGAAGAAATACAGCTTACTTGAAGCATGGAATGCTATAAAACGGGTCCACCGGCGAGCACAGCCAAACGATGGTTTTGCAAATATCTTAATGGAACTAGATCAGAAACTGCATGGGAAAGTGTCCATGGTGTGGCAGCATAGGAAACCGATGATGAAAACTTGCCCTATCTGTGGAAAGAATGTAGGACTAAGCAGCAGCTCTCTTAAGCTGCATCTGCAGAAATCGCATAGAAGACTATCATCAGGGAGTGTAGATAGTGGCATGAAAATGGAGATTGAGAAAGCTTTAGCTGCTTTGAAGATTAGTCGCGGTGGAAGCGTCAGCCCTACGCAAAGGCAGTCTCATTCAATCATAGATGAATAG 936 0.4188 MSWYTQQPYQAITLVDAESNKELEQWNEMLKSDAVKLCQENNFNTGFFEGSDNYCVIDAYELKVRLEHILERIALISEAANSEKPSRITNNLFIGGALAARSLYTLQQLGVTHIMCLCANEIGQSDSQFPDLFAYNNFSVSDDEDSNISSIFEEACDLISDVEGTGQRILVHCFEGKSRSVTLVLAYLMLRKKYSLLEAWNAIKRVHRRAQPNDGFANILMELDQKLHGKVSMVWQHRKPMMKTCPICGKNVGLSSSSLKLHLQKSHRRLSSGSVDSGMKMEIEKALAALKISRGGSVSPTQRQSHSIIDE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00378 311 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 12 310 IPR035010 GO:0004721|GO:0009737|GO:0043622
Accr12g00378 311 FunFam Dual specificity protein phosphatase PHS1 56 230 - -
Accr12g00378 311 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 84 229 IPR029021 -
Accr12g00378 311 Gene3D Protein tyrosine phosphatase superfamily 61 230 IPR029021 -
Accr12g00378 311 SMART dsp_5 84 226 IPR020422 GO:0006470|GO:0008138
Accr12g00378 311 ProSiteProfiles Dual specificity protein phosphatase domain profile. 84 229 IPR020422 GO:0006470|GO:0008138
Accr12g00378 311 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 153 205 IPR000387 GO:0016311|GO:0016791
Accr12g00378 311 CDD DSP 85 222 - -
Accr12g00378 311 Pfam Dual specificity phosphatase, catalytic domain 94 225 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00378 Accr-Chr12 3479890 3481875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00378 9 295 Protein tyrosine phosphatase (PTP) family AT5G23720 73.519 4.28e-148 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00378 K14165 K17614 ahf:112770730 495.738