Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00377 ATGTACCGCGCCTCTGGCTTTCCCCACCGCCAATCGAGGCCCCTTGATCCTATGCCTGCTTCTAGCGCGGGAGAAGCAAAATGTGATACTCTTCGTGAGGAAAGAACAGAAATCAATTTGTCAGAAAGGCTTGGTAAAGCTGCAATGCTGGATGTTGAATCAAGCTCCTTTTCATGGGATGGGCTATCTTCATTGCATAATGTTGAATACGGCAGTAGCAATGACCATTCTGAGGACGACATGAACAAACCTCTTGAGGTAACTGTACATTCTGGGGGAGTTGTCTTCTTTGCCTTTTTTCGTCGCCTTAGGAATGATGATACTTTTCCAAAGGAGGAAGCAGCTGTTATAAAGATATCATCAACAAGAATGGCAACACAATCTGAACGTCTTGGTTATGAGTTTGCCAAGTGGTTGGGAGTCCGAACTCCACAGGGTAGAGTAATTCATAATACCAGTCCTGAATGGCTCCAAATAAAGAGTGCAACAGAAAAGGCAAGAGATGCAGCTAATTCTGAAGGAGATGAAACTGGCAGCATGACATGTTCAGAACTCTTGGAAGCACTTGAGCTGAGCCGATGCCTCTTTTTTATGGGCTACGTGCATGGATCACCTTTACTTGAAAGTTTTTGTGCTTTCGAGTCCCAGGAATCAGTAGAAAGAACATCTGCAGCTCTTGGCAGGGTATTGATGCTAGACCTTGTTATCCGAAATGAAGATAGGCTCCCCTGCCGGGAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGACTGAAAAGGTTATATCTGCTAATGTTGATACACTAGAGGAAGCTTTTGATTCTGCAATGAATCTATATAGACCGAGGGTGATCAGCGCACTTCAAAACGAAAGAAGGTCAACTTCACCGCATAGCAGATTGAGTTCTCATAACCCTGGACTGGTATCACAGGTTTCTGATATTTCAGAGATGGCCGAATCACCAAGATTTTCTAACATGAGCTCTCAAAGCCACACATCAAGTGAAGAACTCTTTAGTGACATCAACATTGTGGCTATTGACTCCGGTGTTCCCCGCCGACCCCCTGCTGGTAAACGTGCAATAGATCAAGCTATTTATCCTAAACTGGTTGAGTTAGTGCTCAATAGTTCTGAGTTTGCCTCCAATCTCTTACATGATATAACTGGAGGTAAATTAGGATATCCTTTGCCAGAAGTCCCAAATTCAGCAACTGATGTTCATTCAAATGACATGTCATCAGCAGTTCGTGCATTCCATTGTGGTTTTCGTGCTGCTCTTAGGGATCTGCAGGGGTTACATATCTTCCTGCTAGCACTTCACCAGAAGCTTGATATCTTGTTAAGATCATTTCTGAACATTATAAGCAAATTATCAATGGGGGAATTTGACAAAGAGGATTCACTGGTTTCAGCTGACACCACTGCACAGGCAGCTGGAGATGGGAACTGTTCCTCTCCAACAAGTAGAGAGAGGTTTGTTAATGATAATCTTCCAGATTTTGATCCAGAATCACAGAAAACTTCTCATAGGGCATCAGGTTCTGGCAGCAGAGATAGTCCTGAATTTTCTGCTGTGGCGAGAGAAGGTTGGCATGGGAAGTTCTGTAAAGGAAGCGGGGAAACACTTCGAAGTCTCCGCTTGACAGCAAAGCTCCGTGACTTCCATAAGTATGCAAAGGTCGATGCAGAGTCTAACAAAGAATTGGAACAATGGAATGAAATGCTAAAAAGTGATGCTGTAAAGCTGTGCCAGGAAAACAATTTCAATACAGGATTTTTTGAGGGGAGTGATAATTACTGTGTCATTGATGCTTACGAACTGAAGGTCAGACTCGAGCATATCCTTGAGAGGATTGCATTGATTTCCGAGGCTGCGAATTCAGAGAAGCCATCCCGGATCACAAATAATCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTTTGTACACACTTCAACAATTGGGAGTCACACATATTATGTGTTTGTGTGCGAACGAAATAGGACAGTCAGATTCTCAATTTCCTGATCTATTTGCATACAATAATTTCTCTGTAAGTGACGATGAAGATTCTAACATCAGTAGCATATTTGAAGAAGCTTGTGATCTGATAAGTGATGTTGAAGGAACAGGTCAGAGAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGCGTTACGTTGGTGCTTGCTTACTTAATGCTCAGGAAGAAATACAGCTTACTTGAAGCATGGAATGCTATAAAACGGGTCCACCGGCGAGCACAGCCAAACGATGGTTTTGCAAATATCTTAATGGAACTAGATCAGAAACTGCATGGGAAAGTGTCCATGGTGTGGCAGCATAGGAAACCGATGATGAAAACTTGCCCTATCTGTGGAAAGAATGTAGGACTAAGCAGCAGCTCTCTTAAGCTGCATCTGCAGAAATCGCATAGAAGACTATCATCAGGGAGTGTAGATAGTGGCATGAAAATGGAGATTGAGAAAGCTTTAGCTGCTTTGAAGATTAGTCGCGGTGGAAGCGTCAGCCCTACGCAAAGGCAGTCTCATTCAATCATAGATGAATAG 2577 0.4319 MYRASGFPHRQSRPLDPMPASSAGEAKCDTLREERTEINLSERLGKAAMLDVESSSFSWDGLSSLHNVEYGSSNDHSEDDMNKPLEVTVHSGGVVFFAFFRRLRNDDTFPKEEAAVIKISSTRMATQSERLGYEFAKWLGVRTPQGRVIHNTSPEWLQIKSATEKARDAANSEGDETGSMTCSELLEALELSRCLFFMGYVHGSPLLESFCAFESQESVERTSAALGRVLMLDLVIRNEDRLPCRELRWRGNSANLLLTEKVISANVDTLEEAFDSAMNLYRPRVISALQNERRSTSPHSRLSSHNPGLVSQVSDISEMAESPRFSNMSSQSHTSSEELFSDINIVAIDSGVPRRPPAGKRAIDQAIYPKLVELVLNSSEFASNLLHDITGGKLGYPLPEVPNSATDVHSNDMSSAVRAFHCGFRAALRDLQGLHIFLLALHQKLDILLRSFLNIISKLSMGEFDKEDSLVSADTTAQAAGDGNCSSPTSRERFVNDNLPDFDPESQKTSHRASGSGSRDSPEFSAVAREGWHGKFCKGSGETLRSLRLTAKLRDFHKYAKVDAESNKELEQWNEMLKSDAVKLCQENNFNTGFFEGSDNYCVIDAYELKVRLEHILERIALISEAANSEKPSRITNNLFIGGALAARSLYTLQQLGVTHIMCLCANEIGQSDSQFPDLFAYNNFSVSDDEDSNISSIFEEACDLISDVEGTGQRILVHCFEGKSRSVTLVLAYLMLRKKYSLLEAWNAIKRVHRRAQPNDGFANILMELDQKLHGKVSMVWQHRKPMMKTCPICGKNVGLSSSSLKLHLQKSHRRLSSGSVDSGMKMEIEKALAALKISRGGSVSPTQRQSHSIIDE 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00377 858 MobiDBLite consensus disorder prediction 475 523 - -
Accr12g00377 858 ProSiteProfiles Dual specificity protein phosphatase domain profile. 631 776 IPR020422 GO:0006470|GO:0008138
Accr12g00377 858 Gene3D Protein tyrosine phosphatase superfamily 609 777 IPR029021 -
Accr12g00377 858 SMART dsp_5 631 773 IPR020422 GO:0006470|GO:0008138
Accr12g00377 858 MobiDBLite consensus disorder prediction 475 494 - -
Accr12g00377 858 FunFam Dual specificity protein phosphatase PHS1 603 777 - -
Accr12g00377 858 Pfam Actin-fragmin kinase, catalytic 37 352 IPR015275 -
Accr12g00377 858 MobiDBLite consensus disorder prediction 1 29 - -
Accr12g00377 858 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 700 752 IPR000387 GO:0016311|GO:0016791
Accr12g00377 858 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 631 776 IPR029021 -
Accr12g00377 858 SUPERFAMILY Protein kinase-like (PK-like) 35 366 IPR011009 -
Accr12g00377 858 Pfam Dual specificity phosphatase, catalytic domain 642 772 IPR000340 GO:0008138|GO:0016311
Accr12g00377 858 Gene3D - 207 335 IPR036940 -
Accr12g00377 858 CDD DSP 632 769 - -
Accr12g00377 858 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 2 857 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00377 Accr-Chr12 3465741 3481875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00377 2 842 Protein tyrosine phosphatase (PTP) family AT5G23720 61.882 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00377 K14165 - gmx:100791993 1217.99