Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00376 ATGGACTGTAAAACATGGAACACCATAGCTATGGCTCTAGTGTTGCTTCTTCACTTGAGCTTAATTATGCCTGTCTTCTCTTTCTCGTCTCACCCAGACAGGATCCTACGGCTTCCTGGACAACCCCACGTAGGTTTCCAACAGTACTCTGGATATGTCACAGTTGATGACAAGAAAGATAAAGCTTTGTTCTACTATTTTGTTGAATCTGAAACTGACCCTGCCTCTAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGTTGTTCTTCACTTGGGGTTGGAGCATTCTCTGAAAATGGACCCTTTAGACCAAATGGTGAAGTTCTGATTCAAAATTATTACAGCTGGAACAGAGAGGCAAACATGCTATATTTGGAGACACCAATTGGAGTGGGATTTTCTTATGCTAAGGATGAATCTAATATGACATTGGGTGATAAGGAAACTGCCAGGGACAATGTCATGTTTCTGAAACTCTGGTTCAACAAGTTCCCTCAATACAGGCAAAGAGATCTGTTTCTTACTGGGGAAAGTTATGCTGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGACTTCAACAAGAAGGAAAAGATATTTAACCTTAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATATGCCACAGACTTCAACTCAAGAGCTGAGTTTTTCTGGTCTCATGGATTAATATCAGATTCAACGTACAAAATGTTCACCTCAGTGTGTAATTATTCTCGGTACGTCAGTGAGTACTATAGAGACTCAGTTTCGCCTCTTTGTTCAAAGGTTATGAGCCAAGTAAGCACAGAAACAAGTAAATTCGTGGACAAATATGATGTGACGCTGGATGTCTGTATCTCCTCAGTTCTTTCACAGTCCAAGGCCATTTGTCCTCAAACACAACAAAAAAGTGAGATGATCGACGTATGTGTTGATGATAAAGTTATAAATTACTTGAACCGAAGAGATGTTCAAGAGGCACTTCATGCCAAACTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAACGTCCTGGACTATGATATGCTCAATCTGGAAATACCTACGCTTCCTATTGTTGGGTCAATAGTCAAAGCTGGAGTTCAGGTCTTAATTTACAGTGGAGATCAAGATTCAGTTATTCCACTAACTGGTACCCGTACCTTAGTTCAGAAACTAGCAAGACAATTAGCACTAAACACTACTGTTCCTTACAGAGTTTGGTTCGAAGGCCAACAGGTTGGTGGGTGGACTCAAGGTTATGGAGATAATAAGCTGTCATTTGCAACCATAAGAGGTGCCTCCCATGAAGCTCCTTTCTCGCAGCCTGAGAGATCGCTGACTCTGTTCAGGTCTTTCTTACAAGGCAGGCCTTTACCTGCTAATATTTTCTGA 1404 0.4181 MDCKTWNTIAMALVLLLHLSLIMPVFSFSSHPDRILRLPGQPHVGFQQYSGYVTVDDKKDKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIQNYYSWNREANMLYLETPIGVGFSYAKDESNMTLGDKETARDNVMFLKLWFNKFPQYRQRDLFLTGESYAGHYVPQLAKLMIDFNKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTSVCNYSRYVSEYYRDSVSPLCSKVMSQVSTETSKFVDKYDVTLDVCISSVLSQSKAICPQTQQKSEMIDVCVDDKVINYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDMLNLEIPTLPIVGSIVKAGVQVLIYSGDQDSVIPLTGTRTLVQKLARQLALNTTVPYRVWFEGQQVGGWTQGYGDNKLSFATIRGASHEAPFSQPERSLTLFRSFLQGRPLPANIF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00376 467 SUPERFAMILY alpha/beta-Hydrolases 37 463 IPR029058 -
Accr12g00376 467 Gene3D - 313 349 - -
Accr12g00376 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 446 IPR001563 GO:0004185|GO:0006508
Accr12g00376 467 FunFam Carboxypeptidase 28 463 - -
Accr12g00376 467 FunFam Carboxypeptidase 359 459 - -
Accr12g00376 467 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Accr12g00376 467 Gene3D alpha/beta hydrolase 29 300 IPR029058 -
Accr12g00376 467 Pfam Serine carboxypeptidase 40 459 IPR001563 GO:0004185|GO:0006508
Accr12g00376 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Accr12g00376 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Accr12g00376 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Accr12g00376 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Accr12g00376 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Accr12g00376 467 Gene3D - 359 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00376 Accr-Chr12 3456275 3459566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00376 321 462 Calmodulin-binding Proteins AT2G22960 30.986 1.37e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00376 K16297 - gmx:100795668 795.423