Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00369 ATGGACTCCTTTCTGGGTTTGCTGCAAGAGAATGATAAGAATGTGATGATAGCTGTAGCACAGGGTGTGGTTCCCGTGCTTGTTCGCTTACTGGATTCGAGCTCTTCGGAGATGAAGGAGAAGATCGTCGCTGCGATATCCAGAGTTTCAACGGTAGATACCAGCAAGCATGCATTAATTGCCGAAGGTTTGGTGCTTTTGAATCACCTGCTTCGAGTTCTTGACCATGGAAGTGGGTTTGCGAAAGAGAAAGCCTGTATTGTACTCCAAGCTCTGACGTTCTCTAAGGAGAACGCCTGGGCAATCGGGTCTAGAGGTGGAATTTCTTCTCTACTGGACATTTGCCAAGTAGGCACGCCTGGTTCCCAAGCTTCGGCGGCCAGGGTTCTGAGAAATCTTGCGGTTTTCCCTGAAGTCAGAGAAAATTTCGTCGAGGAAAATGCGGTTGTTGTTCTGTTAGAGCTCGTTTCATCGGGTACTGCAATAGCCCAAGAAAATGCAATTGGTTGTTTGTCTAATCTAATTTCTGACGACGAAAGCTTGAAATTAATGAGTGTTACGGAAGGAGGGGTTGAGTGTTTGAAGAATTTCTGGGACTCCGTTCCGTCTGTTCATAGTCTCGAAGTAGCTATTGAGTTACTGATAAGTCTGGCTTCGAGTCCACCGATTTCTGAAGTTCTTATTTCAGATGGGTTCATTCCAAGACTTGCGGGTCTGTTACGTTGTGGTGTTCTAAGGATGAGAATTGCAGCTGCTCGAGCTGTTTATACTCTCGGGTCCAGCACCACAAAGGCGAAAAAAGAGATGGGAGAATTTGGATGCATTACACCATTGATACAGATGTTAGATGGCAAAGCTGTTGAAGAGAAAGAAGCAGCTGCAATGGCTTTATCAATACTCATGTTATATACAGGCAATAGAAGGATTTTCCGGAAGGATGAGAGGGGTATAGTTAGTGCAGTTCAGCTTTTGGATCCTTCAATACAGAATTTGGATAAGAAATACCCAGTTTCTATTCTACTCTCACTCGTGCATTCTAAGACTTGTAGGAAACAAATTGCAGCAGCTGGTGCTGGTGTACATACACGAAAACTTGTAGAGATGAATGTTGAGGGATCTAAGAAACTCTTGGATAGCCTTGGTCGTGCAAAGATATGGGAAGCTTTTGCAAGATCCTTGGGATGA 1185 0.4447 MDSFLGLLQENDKNVMIAVAQGVVPVLVRLLDSSSSEMKEKIVAAISRVSTVDTSKHALIAEGLVLLNHLLRVLDHGSGFAKEKACIVLQALTFSKENAWAIGSRGGISSLLDICQVGTPGSQASAARVLRNLAVFPEVRENFVEENAVVVLLELVSSGTAIAQENAIGCLSNLISDDESLKLMSVTEGGVECLKNFWDSVPSVHSLEVAIELLISLASSPPISEVLISDGFIPRLAGLLRCGVLRMRIAAARAVYTLGSSTTKAKKEMGEFGCITPLIQMLDGKAVEEKEAAAMALSILMLYTGNRRIFRKDERGIVSAVQLLDPSIQNLDKKYPVSILLSLVHSKTCRKQIAAAGAGVHTRKLVEMNVEGSKKLLDSLGRAKIWEAFARSLG 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00369 394 Pfam Armadillo/beta-catenin-like repeat 11 48 IPR000225 GO:0005515
Accr12g00369 394 Gene3D - 70 203 IPR011989 -
Accr12g00369 394 Gene3D - 5 69 IPR011989 -
Accr12g00369 394 Gene3D - 204 377 IPR011989 -
Accr12g00369 394 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 390 - -
Accr12g00369 394 SUPERFAMILY ARM repeat 7 303 IPR016024 -
Accr12g00369 394 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 22 64 IPR000225 GO:0005515
Accr12g00369 394 SMART arm_5 11 51 IPR000225 GO:0005515
Accr12g00369 394 SMART arm_5 220 260 IPR000225 GO:0005515
Accr12g00369 394 SMART arm_5 262 302 IPR000225 GO:0005515
Accr12g00369 394 SMART arm_5 95 135 IPR000225 GO:0005515
Accr12g00369 394 SMART arm_5 136 176 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00369 Accr-Chr12 3395434 3396618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00369 7 248 U-box Gene Family AT2G23140 29.630 3.07e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00369 - - qsa:O6P43_030678 539.265