Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00368 ATGAAAACAACAACCGACACCTCCGATCCCATCACTCTCTCCGATCAGCTTCTTTCCTCTCTTCTCGGCGAAATCCCCACCATTCCTCATTTCAAAGGTAAGTGGTCTCTCGTCACTTCAAAACTTCACCTCCTTCACTCTCGACTTGCCGATTTCTCCTCCCACTTTCCTCATTCCTCCTCCTCCAACTCTCTCTCCAGAGACCTTCTTCTCTCCATAGCTAAGACGCTCAGGGACGCCGTTTCCCTTGTCAAGGATTGCCAGTTCCCCACCTTATCCCACGGCAAGCTCAAGACTCAGAGCCTCATTGATTCCCTCCTTGCCACCCTCGACCGCTATCTCTCAGACTCTGATGTTCTCCTCAAAAGCGGCGTCCTCCGCGACGACGCCGTTTCAACTACGTCTAACAGGGACGGTGTTCGATCTGAATCTACGTATTTGACCGCTCGTCTGCAAATTGGGTCCTCTGAGTCTAGGATTTTGGCTATGGACTCCTTTCTGGGTTTGCTGCAAGAGAATGATAAGAATGTGATGATAGCTGTAGCACAGGGTGTGGTTCCCGTGCTTGTTCGCTTACTGGATTCGAGCTCTTCGGAGATGAAGGAGAAGATCGTCGCTGCGATATCCAGAGTTTCAACGGTAGATACCAGCAAGCATGCATTAATTGCCGAAGGTTTGGTGCTTTTGAATCACCTGCTTCGAGTTCTTGACCATGGAAGTGGGTTTGCGAAAGAGAAAGCCTGTATTGTACTCCAAGCTCTGACGTTCTCTAAGGAGAACGCCTGGGCAATCGGGTCTAGAGGTGGAATTTCTTCTCTACTGGACATTTGCCAAGTAGGCACGCCTGGTTCCCAAGCTTCGGCGGCCAGGGTTCTGAGAAATCTTGCGGTTTTCCCTGAAGTCAGAGAAAATTTCGTCGAGGAAAATGCGGTTGTTGTTCTGTTAGAGCTCGTTTCATCGGGTACTGCAATAGCCCAAGAAAATGCAATTGGTTGTTTGTCTAATCTAATTTCTGACGACGAAAGCTTGAAATTAATGAGTGTTACGGAAGGAGGGGTTGAGTGTTTGAAGAATTTCTGGGACTCCGTTCCGTCTGTTCATAGTCTCGAAGTAGCTATTGAGTTACTGATAAGTCTGGCTTCGAGTCCACCGATTTCTGAAGTTCTTATTTCAGATGGGTTCATTCCAAGACTTGCGGGTCTGTTACGTTGTGGTGTTCTAAGGATGAGAATTGCAGCTGCTCGAGCTGTTTATACTCTCGGGTCCAGCACCACAAAGGCGAAAAAAGAGATGGGAGAATTTGGATGCATTACACCATTGATACAGATGTTAGATGGCAAAGCTGTTGAAGAGAAAGAAGCAGCTGCAATGGCTTTATCAATACTCATGTTATATACAGGCAATAGAAGGATTTTCCGGAAGGATGAGAGGGGTATAGTTAGTGCAGTTCAGCTTTTGGATCCTTCAATACAGAATTTGGATAAGAAATACCCAGTTTCTATTCTACTCTCACTCGTGCATTCTAAGACTTGTAGGAAACAAATTGCAGCAGCTGGTGCTGGTGTACATACACGAAAACTTGTAGAGATGAATGTTGAGGGATCTAAGAAACTCTTGGATAGCCTTGGTCGTGCAAAGATATGGGAAGCTTTTGCAAGATCCTTGGGATGA 1671 0.4656 MKTTTDTSDPITLSDQLLSSLLGEIPTIPHFKGKWSLVTSKLHLLHSRLADFSSHFPHSSSSNSLSRDLLLSIAKTLRDAVSLVKDCQFPTLSHGKLKTQSLIDSLLATLDRYLSDSDVLLKSGVLRDDAVSTTSNRDGVRSESTYLTARLQIGSSESRILAMDSFLGLLQENDKNVMIAVAQGVVPVLVRLLDSSSSEMKEKIVAAISRVSTVDTSKHALIAEGLVLLNHLLRVLDHGSGFAKEKACIVLQALTFSKENAWAIGSRGGISSLLDICQVGTPGSQASAARVLRNLAVFPEVRENFVEENAVVVLLELVSSGTAIAQENAIGCLSNLISDDESLKLMSVTEGGVECLKNFWDSVPSVHSLEVAIELLISLASSPPISEVLISDGFIPRLAGLLRCGVLRMRIAAARAVYTLGSSTTKAKKEMGEFGCITPLIQMLDGKAVEEKEAAAMALSILMLYTGNRRIFRKDERGIVSAVQLLDPSIQNLDKKYPVSILLSLVHSKTCRKQIAAAGAGVHTRKLVEMNVEGSKKLLDSLGRAKIWEAFARSLG 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00368 556 Gene3D - 136 360 IPR011989 -
Accr12g00368 556 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 184 226 IPR000225 GO:0005515
Accr12g00368 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 15 552 - -
Accr12g00368 556 Gene3D - 361 541 IPR011989 -
Accr12g00368 556 Pfam Armadillo/beta-catenin-like repeat 173 210 IPR000225 GO:0005515
Accr12g00368 556 SMART arm_5 298 338 IPR000225 GO:0005515
Accr12g00368 556 SMART arm_5 382 422 IPR000225 GO:0005515
Accr12g00368 556 SMART arm_5 424 464 IPR000225 GO:0005515
Accr12g00368 556 SMART arm_5 257 297 IPR000225 GO:0005515
Accr12g00368 556 SMART arm_5 173 213 IPR000225 GO:0005515
Accr12g00368 556 SUPERFAMILY ARM repeat 147 465 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00368 Accr-Chr12 3395434 3397104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00368 169 413 U-box Gene Family AT2G23140 29.675 1.09e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00368 - - qsa:O6P43_030678 684.871