Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00367 ATGGATGATGTCCACCACCGTGAAAATGGCATACAGAAGGTGGACTACTATAGAGGAGCTCATTCCCTGTGGAGTATGGTCCCCCAGCATCAGGTAAAGGAACCAAATGCCCTGGTCATGAATAAGAAAATTATGTCTGTTATTGTTGAGAGAGAAGCTGCAATTCGAGAACGGAATGCGGCTTTATCCGAAAAGAATGAAGCACTGGCTGCTCGAGATGAAGCCCTTCGGCAGAGGGATGAAGCGCTTCTACAGAGGGATAGCGCCTTGATGGAACGGGATAATGCTCTTGCAGCCCTTCAAATCCAGGATAATGCCACCAACTTCTCATTGGGTTGTGGCACTCAACGTGGATCAAAGCGGATGCATCATTCCTCAAATCATTTCGGTCAAATGGCAGAAGGTGCTTATAGAACAAAGGATTTGACCACAACCGATGCCTTCCCAGTAAGTATTGTAGCTTCTGAAGCGGGCAAGTATAATCAGGCCAAGAGAACAAGGGAGAACAAGGTAGATTTTTCTAAGGCGTCAAAACCACTAGGCAAAGTGAAAAAAGTGAGTGAGGACTTAAATAGGCAAGCTTCTTCTGAAGTGACAAAGATTAAAACTGAGTGGGATAAACAAGATGTTGGATTAAATTTGATTCAATTTGATGAAAATACCATGCCAGCCCCAGTTTGCACATGTACCGGAGTACCAAGGCAATGCTACAAATGGGGGAATGGTGGGTGGCAATCATCTTGTTGTACCACCGCCTTGTCCATGTATCCATTACCGCAGCTTCCAAACAAGCGACATGCACGAGTTGGAGGGCGAAAGATGAGTGGAAGTGTCTTCACAAGACTTCTTAGCAGGGTAGCCTCTCAAGGCCGTGAATTATATATACCATTAGATCTCAAAGACTATTGGGCTAGACATGGAACAAATCGCTACATCACGATCAAGTAA 948 0.4504 MDDVHHRENGIQKVDYYRGAHSLWSMVPQHQVKEPNALVMNKKIMSVIVEREAAIRERNAALSEKNEALAARDEALRQRDEALLQRDSALMERDNALAALQIQDNATNFSLGCGTQRGSKRMHHSSNHFGQMAEGAYRTKDLTTTDAFPVSIVASEAGKYNQAKRTRENKVDFSKASKPLGKVKKVSEDLNRQASSEVTKIKTEWDKQDVGLNLIQFDENTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTALSMYPLPQLPNKRHARVGGRKMSGSVFTRLLSRVASQGRELYIPLDLKDYWARHGTNRYITIK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00367 315 Pfam GAGA binding protein-like family 1 315 IPR010409 -
Accr12g00367 315 Coils Coil 59 85 - -
Accr12g00367 315 PANTHER - 1 315 IPR010409 -
Accr12g00367 315 SMART GAGA_bind_2 1 315 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00367 Accr-Chr12 3388592 3389624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00367 1 315 BBR or BPC Transcription factor family AT2G21240 56.467 4.95e-126 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Accr12g00367 GAGA_bind 4e-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00367 - - jre:108986984 491.115