Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00365 ATGGGTTGCGTGCTCGGAGCGGCCAGGGATGATGCAGGCCGAAGGGAGGTCTCCGGAGCTCAGAACCGTCGTGAGCAAAATTCTGCTGCTGACGGTGGTAATGCTGTTAGCGTTGCGAACCGAGGAAAGGAGAAGGAGAAGCAAAGGACTCGGCAGCATGGCAGCGAATTTGTTTATAATCTCCCGGGACCGGAACGCCGGAAGCCTTGTCTTGATCCATACGCTCAAACTCCTCAGGGTTGGCCATCTTGGTTGATGGCTGTGGCTGGCGACGCTATCCGGGATTGGACTCCTCGGCGCGCCAACACGTTCGAGAAGCTTGCGAAGATTGGACAGGGGACGTATAGCAATGTATATAAAGCGAGAGACCTTCTTACCGGAAAGATAGTAGCTTTAAAGAAAGTTAGGTTTGATAATCTGGAGGCAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTTTTGAGGCGGCTTGACCACCCAAACATCGTGAAACTCGAGGGCTTGGTTACTTCTAGAATGTCGTGCAGTCTTTACTTAATATTCGAGTATATGGAACACGATCTTGCTGGCCTTGCTGCTGGGCAAGGTGTTAAGTTCACTGAGCCTCAAGTGAAATGCTATATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAACAAAGGTGTCTTGCATCGTGATATCAAGGGTTCCAATCTGCTTATTGATGATGAAGGAATCCTTAAAATTGCAGATTTTGGACTGGCAACTTCGTATGATCCTGAGCACAAGCAACCCTTGACAAGTAGAGTTGTCACACTTTGGTATCGTGCTCCTGAGCTTCTTCTTGGGGCTACACATTATGGTGTTGGCATTGACCTCTGGAGTGCTGGCTGCATCTTGGCAGAGCTCCTTACTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACTGCACAAAATATTTAAATTATGTGGTTCTCCATCTGATGGTTACTGGAAGAAATATAAATTGCCAAATGCTACACTCTTTAAGCCACAGCAGCCATATAAACGATGCATTTTAGAAACCTTCAAGGATTTCCCTCCTTCTTCCGTACATCTAATATGTACTCTTCTTTCAATAGATCCTGATGACCGTGGCACTGCCTTGACTGCTCTAAATAGTGATTTTTTTACCACGGAGCCCTATGCTTGTGAACCATCAAGTTTGCCAAAATATCCTCCCAGCAAAGAACTGGATATAAAACTGAGAGATGAAGAAGCTAGAAGGCGAAAAGCTCTAAATGGGAAAACTAATGCAGTTGATGGTACCAAAAAAGTCCGAGTACGTGAGCGTGGACGGGCCATGCCTGCCCCTGAAGCCAATGCAGAGATCCAGTCAAACTTGGATAGGTGGAGAGTTGTGACACATGCAAATGCAAAAAGCAAGAGCGAGAAATTCCCGCCACCTCATCAAGACGGCACCGTTGGATATCCATTGGATGCATCTCATAAGGGACCCGTTTCATTTGGTGCCACTGATGCTTCCTTTAGCTCCGAAGTATTTAATTCAAAACCTGCAGGATCTGTTGAAAGCCATGCTGCTTCAGGACCTGACAGAGGTAAGAAAAAGAAAACAGATTCTTCATCATGGAAATTGATGCGTCCGTTCAAGTAA 1647 0.4663 MGCVLGAARDDAGRREVSGAQNRREQNSAADGGNAVSVANRGKEKEKQRTRQHGSEFVYNLPGPERRKPCLDPYAQTPQGWPSWLMAVAGDAIRDWTPRRANTFEKLAKIGQGTYSNVYKARDLLTGKIVALKKVRFDNLEAESVKFMAREILVLRRLDHPNIVKLEGLVTSRMSCSLYLIFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHNKGVLHRDIKGSNLLIDDEGILKIADFGLATSYDPEHKQPLTSRVVTLWYRAPELLLGATHYGVGIDLWSAGCILAELLTGKPIMPGRTEVEQLHKIFKLCGSPSDGYWKKYKLPNATLFKPQQPYKRCILETFKDFPPSSVHLICTLLSIDPDDRGTALTALNSDFFTTEPYACEPSSLPKYPPSKELDIKLRDEEARRRKALNGKTNAVDGTKKVRVRERGRAMPAPEANAEIQSNLDRWRVVTHANAKSKSEKFPPPHQDGTVGYPLDASHKGPVSFGATDASFSSEVFNSKPAGSVESHAASGPDRGKKKKTDSSSWKLMRPFK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00365 548 MobiDBLite consensus disorder prediction 502 520 - -
Accr12g00365 548 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00365 548 SUPERFAMILY Protein kinase-like (PK-like) 97 393 IPR011009 -
Accr12g00365 548 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00365 548 MobiDBLite consensus disorder prediction 470 548 - -
Accr12g00365 548 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00365 548 Gene3D Phosphorylase Kinase; domain 1 90 186 - -
Accr12g00365 548 MobiDBLite consensus disorder prediction 526 541 - -
Accr12g00365 548 PANTHER CELL DIVISION PROTEIN KINASE 102 392 - -
Accr12g00365 548 Gene3D Transferase(Phosphotransferase) domain 1 187 428 - -
Accr12g00365 548 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Accr12g00365 548 FunFam probable serine/threonine-protein kinase At1g54610 187 428 - -
Accr12g00365 548 CDD STKc_CDK9_like 104 388 - -
Accr12g00365 548 MobiDBLite consensus disorder prediction 1 64 - -
Accr12g00365 548 FunFam probable serine/threonine-protein kinase At1g54610 91 186 - -
Accr12g00365 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00365 Accr-Chr12 3376853 3380605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00365 96 424 Core Cell Cycle Gene Families AT5G10270 50.712 1.16e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr12g00365 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00365 K08819 - gmx:100807756 889.412