Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00362 ATGGAAAAGATGAATTTTATGAAGAATGGAATTTGCAGATTGCCTCCTGGATTTAGGTTCCAGCCGACAGATGAAGAACTTGTGTTTCAGTACTTGAAATGCAAGGTTCTTTCATATCCATTGCCTACTTCGATCATCCCTGAAGTCAATGTCTGCAACTACGATCCTTGGGATTTGCCTGGTAATTGTGAAGAGCAAGAGAGGTATTTCTTCAGTTACAAGGAAGCGAAATACAGAAATGGCGATCGAATGAACCGAATGACCAAGTCTGGGTATTGGAAGGCAACTGGTTCAGACAAGAAGATATCATCTCAAGCAAATAATAACAATGACAATTACAGATTTTTTGGGGTGAGAAAAACCCTAGTTTTTCACCAAGGGAAGGCTCCTAACGGCTCGAGAACTAACTGGGTCATGCACGAATATCGCCTTGTCATTGCAGAAACCAGTGCTCCCAACCCAACTCGCCTGTGTCAAGGGAAGGAGGTAGGAGATTGGGTTGTGTGTCGGATAAGCATGAAGACGACAAGAGAAGGTGGTCATGTGTTGGCGAGAATGAAGAGAAGCTCAAGTGACATTACAGAGGTGTGTTCAGGCGTAGCAGATCATGAAGAAATTAACAAGTGGCCATAG 633 0.4344 MEKMNFMKNGICRLPPGFRFQPTDEELVFQYLKCKVLSYPLPTSIIPEVNVCNYDPWDLPGNCEEQERYFFSYKEAKYRNGDRMNRMTKSGYWKATGSDKKISSQANNNNDNYRFFGVRKTLVFHQGKAPNGSRTNWVMHEYRLVIAETSAPNPTRLCQGKEVGDWVVCRISMKTTREGGHVLARMKRSSSDITEVCSGVADHEEINKWP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00362 210 SUPERFAMILY NAC domain 9 174 IPR036093 GO:0003677|GO:0006355
Accr12g00362 210 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Accr12g00362 210 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 184 - -
Accr12g00362 210 ProSiteProfiles NAC domain profile. 14 174 IPR003441 GO:0003677|GO:0006355
Accr12g00362 210 Pfam No apical meristem (NAM) protein 15 144 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00362 Accr-Chr12 3347506 3348979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00362 1 174 NAC Transcription Factor Family AT5G13180 58.046 1.16e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr12g00362 NAM 9.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00362 - - gmx:100803200 274.248