Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00361 ATGGAAAAGATGAATTTTATGAAGAATGGAATTTGCAGATTGCCTCCTGGATTTAGGTTCCAGCCGACAGATGAAGAACTTGTGTTTCAGTACTTGAAATGCAAGGTTCTTTCATATCCATTGCCTACTTCGATCATCCCTGAAGTCAATGTCTGCAACTACGATCCTTGGGATTTGCCTGGTAATTGTGAAGAGCAAGAGAGGTATTTCTTCAGTTACAAGGAAGCGAAATACAGAAATGGCGATCGAATGAACCGAATGACCAAGTCTGGGTATTGGAAGGCAACTGGTTCAGACAAGAAGATATCATCTCAAGCAAATAATAACAATGACAATTACAGATTTTTTGGGGTGAGAAAAACCCTAGTTTTTCACCAAGGGAAGGCTCCTAACGGCTCGAGAACTAACTGGGTCATGCACGAATATCGCCTTGTCATTGCAGAAACCAGTGCTCCCAACCCAACTCGCCTGTGTCAAGGGAAGGAGGTAGGAGATTGGGTTGTGTGTCGGATAAGCATGAAGACGACAAGAGAAGGTGGTCATGTGTTGGCGAGAATGAAGAGAAGGTCAGAGATAGATGTTGTTAATGGGGGAGAGACAAGATTCTTTGATTTTATGAGGGTTGCTGCTGAACTCCATTATTCTGACAAGTCATCGTCTTGTTCCAGCTCAAGTGACATTACAGAGGTGTGTTCAGGCGTAGCAGATCATGAAGAAATTAACAAGTGGCCATAG 735 0.4313 MEKMNFMKNGICRLPPGFRFQPTDEELVFQYLKCKVLSYPLPTSIIPEVNVCNYDPWDLPGNCEEQERYFFSYKEAKYRNGDRMNRMTKSGYWKATGSDKKISSQANNNNDNYRFFGVRKTLVFHQGKAPNGSRTNWVMHEYRLVIAETSAPNPTRLCQGKEVGDWVVCRISMKTTREGGHVLARMKRRSEIDVVNGGETRFFDFMRVAAELHYSDKSSSCSSSSDITEVCSGVADHEEINKWP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00361 244 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Accr12g00361 244 Pfam No apical meristem (NAM) protein 15 144 IPR003441 GO:0003677|GO:0006355
Accr12g00361 244 ProSiteProfiles NAC domain profile. 14 174 IPR003441 GO:0003677|GO:0006355
Accr12g00361 244 SUPERFAMILY NAC domain 9 174 IPR036093 GO:0003677|GO:0006355
Accr12g00361 244 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00361 Accr-Chr12 3347506 3348979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00361 1 207 NAC Transcription Factor Family AT5G13180 49.107 3.52e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr12g00361 NAM 1.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00361 - - gmx:100803200 296.204