Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00338 ATGGAGGATTGTTGTCATCAAGTTACGTTCATTGGGCAGCATGAGGAAAATGGAAATAAACTTTTTCTTGACATTCCAAAAGATTTGAAAGATGTTGAAAAATCTATTAAGACTGAAACTTTCTTTATGCCGGTATTTAAGAAAAGAAAGCGACTTAGCCGTGATCAGCTTAGAGAGATAAAAGCAGGGTTAGGTGGGAAGCTGACACAACCTAGTAGCAAGCCTAAGAAAAAGAAGCATGAGAGTACGGACAGATGGTCATCTGAGAGGTATCAGCTTGCTGAGCAAAGCATGTGGGAGGTCTTGAAGGCGAAAGGTGCAACATTTTCCAACCCCATCTCCCGACCTACACTACGGATGGCTGCCCGTAAACACATTGGTGATACTGGACTATTGGACCACTTGCTGAAGCACATTGATGGTAAAGTGGCACCTTGTGGCACTGAGCGATTTAGGCGGTGGTTCAACACCAAAGGAGTCATGGAGTATTGGTTGGAGGGTGCTAGCCTAGATAAGGTCCGCCAGGATGCTGGGGTGCAGGACCCATTTTGGATTCCGCCATCTACATTTCAAGCAGGCAGTCCCCCTCCTCAGAATTCTGATTCTTCTGGCGAACTGAAATTGCTTCAAATAGAAATGGCCAAAATGAAGAAAGATATGGAGGAGCTCATAAACAAGAACCACGAGAAAAATGAAATTAATATGATGGAGGAGACACACAAGGAATTAGTAAAGTGGAAAGCTATGACTGAGCAACGCCTAACTGGGATTTCATCTTCTTTGAAGGGTGTACAGGGCATGTATAGTGATTTGATAAGTTGGAAAAGTAAAGTTGAGCAACAGCTTGTGGAAATAACAAAGAAATTGAGTGATCAGAAAGCATCAAGGGAAGGCACGACCAATCCTCCTCTAGAAAGGTGGGAAGATTGGTTTGAAAGCACCAATCTAGAGAATATTCAGGGAGACGTTGACCTTTTACCATGGTTTGGGAGTACAGAGCTGGTTAATCTTGAGCAAGAAGCTGCCTTCCAAGATCCTAACTCAGCCCTGCCCAGTCAGCTGCTCAATGACAATACGACCAACATAAAGAGTGATTTTCTGGAAATGTTGCCCAACAAACAAGAGGAAGATCAACCTAACGTGACTCCGGATTCTTCTGTGACTGTTAATTCAAAGTCAGACCTTGACAACTCGGTGATGCTGTTTCAGGAGATGCTCACGGACTTGTTTAAATGGAAAGATAAGGTGGAGAAGCAGATGGCCGAGTTATCAAATTTTGTATATGGAATGCTGGCTACCAATTAG 1305 0.4345 MEDCCHQVTFIGQHEENGNKLFLDIPKDLKDVEKSIKTETFFMPVFKKRKRLSRDQLREIKAGLGGKLTQPSSKPKKKKHESTDRWSSERYQLAEQSMWEVLKAKGATFSNPISRPTLRMAARKHIGDTGLLDHLLKHIDGKVAPCGTERFRRWFNTKGVMEYWLEGASLDKVRQDAGVQDPFWIPPSTFQAGSPPPQNSDSSGELKLLQIEMAKMKKDMEELINKNHEKNEINMMEETHKELVKWKAMTEQRLTGISSSLKGVQGMYSDLISWKSKVEQQLVEITKKLSDQKASREGTTNPPLERWEDWFESTNLENIQGDVDLLPWFGSTELVNLEQEAAFQDPNSALPSQLLNDNTTNIKSDFLEMLPNKQEEDQPNVTPDSSVTVNSKSDLDNSVMLFQEMLTDLFKWKDKVEKQMAELSNFVYGMLATN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00338 434 Coils Coil 206 233 - -
Accr12g00338 434 PANTHER PROTEIN DYAD 5 432 IPR044221 GO:0007131|GO:0051177|GO:0051321
Accr12g00338 434 SUPERFAMILY Myosin rod fragments 212 296 - -
Accr12g00338 434 MobiDBLite consensus disorder prediction 63 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00338 Accr-Chr12 3144892 3146842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00338 85 169 PHD Transcription Factor Family AT5G22260 44.186 5.14e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00338 - - gmx:100806484 555.444