Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00337 ATGGGCAGATCTCCTTGCTGTGAGAAAGAGCACACCAACAAAGGCGCCTGGACCAAAGAGGAAGACCAACGCCTCATCAATTACATCAACCTCCATGGCGAGGGTTGCTGGCGATCCCTCCCCAGAGCTGCTGGTTTGCTCAGATGTGGCAAGAGTTGCAGACTCCGATGGATTAACTACCTCCGACCTGATCTCAAGCGGGGCAACTTCACTGACCAAGAAGATGAGCTCATCATCAACCTCCACAGCCTCCTCGGCAACAAGTGGTCTCTGATCGCCGCGAGATTACCGGGCAGAACCGACAATGAGATCAAGAACTACTGGAATACCCACATCAAACGCAAACTCTACAGCCGCGGCATCGACCCTCAAACGCATCGACCCCTCAACGCCCCCGCTGCCACCGCCACTACCGATCCTGCCGCTGTCGTCAGCAGCAACAACAACAATAACGGCAAGTTTCAGTTAGTGACTGAATTGGGTAGCGCCAGCAACAACAACACCACCAACAATAATGCCACAAAGATCGTAAAGACCGAGTCGGCCGCCTATGAAGACTCCAATAGCAGCAGTGGGGTCACCACATCAGAAGAAGCCACCTTTACACAAGCTCCGCTCAACTTGGAGCTCACCATCGGCCTTCCCTCTGATCAGCCTGCTTCTTTGAACCAACACAACTTTAAAGGACATCCACAAGAAGACCACCAGCAACAACCTCGGTCAGAACAACAAGTCTTGTTCCATTGGTTTGGCAACTTTAGCAGTAGTGCTCGTCATCAAGGTGTGTGCCTGTGTAACGGTCTAGGGTTTCAAAGCATGGATCACTCATGTAGCTGCAAATTATCCATGGGTGCTTCTGTTGTGGCTCCTGCAGCTCCTTCCCCTCCTAATTCTGTTACTGAAACTGCCACCGATAATATGTATAGACTTTACACGCCCTTGAATATTTAG 951 0.511 MGRSPCCEKEHTNKGAWTKEEDQRLINYINLHGEGCWRSLPRAAGLLRCGKSCRLRWINYLRPDLKRGNFTDQEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAPAATATTDPAAVVSSNNNNNGKFQLVTELGSASNNNTTNNNATKIVKTESAAYEDSNSSSGVTTSEEATFTQAPLNLELTIGLPSDQPASLNQHNFKGHPQEDHQQQPRSEQQVLFHWFGNFSSSARHQGVCLCNGLGFQSMDHSCSCKLSMGASVVAPAAPSPPNSVTETATDNMYRLYTPLNI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00337 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr12g00337 316 CDD SANT 69 112 IPR001005 -
Accr12g00337 316 Gene3D - 14 66 - -
Accr12g00337 316 CDD SANT 16 61 IPR001005 -
Accr12g00337 316 FunFam MYB-related transcription factor 13 66 - -
Accr12g00337 316 MobiDBLite consensus disorder prediction 179 199 - -
Accr12g00337 316 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Accr12g00337 316 MobiDBLite consensus disorder prediction 213 227 - -
Accr12g00337 316 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr12g00337 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr12g00337 316 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr12g00337 316 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr12g00337 316 MobiDBLite consensus disorder prediction 213 242 - -
Accr12g00337 316 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 222 - -
Accr12g00337 316 Gene3D - 69 116 - -
Accr12g00337 316 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr12g00337 316 FunFam Myb transcription factor 68 137 - -
Accr12g00337 316 SMART sant 66 114 IPR001005 -
Accr12g00337 316 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00337 Accr-Chr12 3134071 3135217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00337 1 217 MYB Transcription Factor Family AT4G38620 60.731 3.67e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr12g00337 Myb_DNA-binding 1.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00337 K09422 - gmx:100808083 375.555