Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00335 ATGGAGAGGAAAACATTCGGGCTCTTCCTCTTGGTCCTCATTGTGCTAGCTTCTGAGGTGGCGGTGCAGACAGAGGGAAGGATGTGCCAGTCACAGAGTCACGGGTTCAGGGGAGCATGCGTGCGCAGCCACAACTGTGCGCTGGTGTGCAGGAACGAAGGTTTCTCCGGCGGCCGGTGCCGAGGGTTCCGTCGCCGCTGTTTCTGCACTAGGCTTTGTTGA 222 0.5901 MERKTFGLFLLVLIVLASEVAVQTEGRMCQSQSHGFRGACVRSHNCALVCRNEGFSGGRCRGFRRRCFCTRLC 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00335 73 ProSitePatterns Gamma-thionins family signature. 27 50 IPR008176 GO:0006952
Accr12g00335 73 Gene3D - 27 73 IPR036574 -
Accr12g00335 73 SMART gth_4 28 73 IPR003614 GO:0006952
Accr12g00335 73 Pfam Gamma-thionin family 27 73 - -
Accr12g00335 73 SUPERFAMILY Scorpion toxin-like 27 73 IPR036574 -
Accr12g00335 73 PRINTS Purothionin signature 58 72 IPR008176 GO:0006952
Accr12g00335 73 PRINTS Purothionin signature 28 43 IPR008176 GO:0006952
Accr12g00335 73 PANTHER DEFENSIN-LIKE PROTEIN 1 5 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00335 Accr-Chr12 3109660 3109995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00335 1 73 Plant Defensins Gene Families AT5G63660 60.274 2.58e-29 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00335 - - sind:105178018 83.1889