Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00316 ATGCAGGAAGACAAGAAGATGAAGGTGAAGAAAGGTTGGCTTGCCGTTCAGGTAGGTTTGGCGGACGAAGATGGCGTCCCTCAGAGATTCCTCATCCCTATTTCTTATCTCCGGCATCCTCTTGTCGTCGGCCTCCTCGACAGAGCTCAAGAGGTTTACGGCTACCACCCCGACGGCCCCCTCCGCCTCCCCTGCTCCGTCGACGACTTCCTTCATCTCCGGTGGCGAATCGAGAAAGAGTCCTCTCACACCCACCTCCACCACCACCACCACCACCCCCAGTATCTCCCTCAGGCTCTCTCTTTCCGCTCATGTTAA 318 0.5692 MQEDKKMKVKKGWLAVQVGLADEDGVPQRFLIPISYLRHPLVVGLLDRAQEVYGYHPDGPLRLPCSVDDFLHLRWRIEKESSHTHLHHHHHHPQYLPQALSFRSC 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00316 105 Pfam Auxin responsive protein 6 76 IPR003676 GO:0009733
Accr12g00316 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 73 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00316 Accr-Chr12 3000560 3000877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00316 9 79 Calmodulin-binding Proteins AT3G43120 42.466 4.09e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00316 K14488 - cave:132166734 158.688