Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00310 ATGAACGGCGAATTACAGTTACCTCCTGGATTCAGATTTCACCCCACGGACGAGGAGTTGGTGAAGCACTATCTCTGTGCAAAATGTGCTTCCCAGCCTATTGCTGTTCCTATTATCAAGGAAATTGATTTGTACAAGTTTGATCCTTGGCAGCTTCCAGAAATGACGCAATACGGAGAGAAAGAATGGTATTTCTTCTCGCCAAGGGACAGAAAATATCCAAACGGATCAAGACCCAACAGGGCCGCCGGAAGCGGTTATTGGAAGGCCACCGGAGCAGATAAGGCCATCGGAAAACCTAAGCCTCTCGGAATCAAGAAGGCACTCGTTTTCTACGCCGGTAAAGCCCCCAAAGGCATCAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGATCGCTCTGCTCGCAAGAACAACAACCTCAGGCTTGATGATTGGGTATTGTGCCGGATTTACAACAAGAAAGGTGTGATTGAGAAATACAACACCCGGGATCACAAATCGAGCGGGTTTGTTTCCTCAGATGTCGATGAGCACGAAACTAAACCAGAAATCAACATGGTCGGCGGTCACCAGCTGTACACGGACACGTCGGAATCGGTGCCGCGGTTGCACACGGATTCCAGCTGCTCCGATCACGTGGCGTCGCCGGACGGCACGTGCTGCGACAAGGAGGTGCAGAGCGAGGCCAAGTGGAATGAGCTGGCACTGGGATTGAGAGACGACGCCTTCGATTTCGAGCTCAACAATTACATGGACAATATGAATAGTAACTTCATGGGATATGACGCTTTTGCCCCTCAGGCCCAGTACCAAATGAACCAGCTCTCGCCCTTACAGGACATGTTCATGTATCTTCAGAAGCCATTTTAA 882 0.4966 MNGELQLPPGFRFHPTDEELVKHYLCAKCASQPIAVPIIKEIDLYKFDPWQLPEMTQYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKAIGKPKPLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSARKNNNLRLDDWVLCRIYNKKGVIEKYNTRDHKSSGFVSSDVDEHETKPEINMVGGHQLYTDTSESVPRLHTDSSCSDHVASPDGTCCDKEVQSEAKWNELALGLRDDAFDFELNNYMDNMNSNFMGYDAFAPQAQYQMNQLSPLQDMFMYLQKPF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00310 293 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Accr12g00310 293 PANTHER NAC TRANSCRIPTION FACTOR 56 7 203 - -
Accr12g00310 293 FunFam NAC transcription factor 16 161 - -
Accr12g00310 293 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Accr12g00310 293 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Accr12g00310 293 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00310 Accr-Chr12 2946163 2947236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00310 1 293 NAC Transcription Factor Family AT1G01720 63.279 8.94e-123 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr12g00310 NAM 1.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00310 - - gmx:100170751 438.343