Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00275 ATGCCCGCTTGGTGGGGAAGAAAGTCCAGCAAGAACAAGGAGGAGCAGCGGCAACAGCAGCAGCTTCCCCCGGCTGAATCACATGGTGGAATTCAGTTTAATTTCATCAAATCACCGATCAGGAATGTTGCCAAGAAAGGTAGAGATAAACCTAAGAGCTTTGACGAGGTCTCAGCCGCGATAATTTCTCGGAGTTCACCCAGAACCAGCAGGGATTTTACTCCTGCCGCCGCCGCCGCCGCTCCCGTTGGTGGATCGTCCTCGGGATTTTCGTGCTTGGATTCTGATGGCTGCGAGAAGGTAGGCCATCCCTTGCCTCGACCGTCGATTTCGTCCCCGCAGAGCTTTGGGAACGATCAAGGAGATGGAGATGGCCTGGGATCTGCATCGATCTCTGGTTCAAGCGTGAGTTCTTCTGGGTCCTACGATCATCATCCAATCTCTCAATTGGATGGCATCAGGGGACGAAGTGAAATGAGGATTAACATGAGGTCAAAAAGCCCAGGTCCTGGGTCAAGAGGGCCCACCAGCCCGACTTCACCCCTCCATCCAAGATTGCATGTGTTAAGTATTGACTCTCCTACAGGCAAACAAGATGATGGAAGGAGTGAATGTCATCCATTGCCTCTACCACCAGGTTCACCGACTAGCCCTTCTGCGCTCTCCAATGCAAAAGCAAATAGTCTTGTCGAAAACACTACCAACAATCTGTCCAAGTGGAAGAAAGGAAAGCTTTTAGGACGAGGGACATTTGGTCATGTTTACCTGGGATTTAACAGTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTCAGAGTTTTCTCTGATGATCAAACATCGAAAGAGTGCCTCAAACAACTTAACCAGGAGATAAATCTGCTCAGTTCGTTTTCACATCCTAACATTGTTGAATACTATGGAAGTGACCTGGGAGAAGACGCACTTTCTGTTTATTTAGAATATGTCTCTGGCGGTTCCATCCATAAACTGCTTCAGGAATATGGTCCATTTAAGGAACCTGTTATTCAGAATTATGTTAGGCAGATTGTCTCTGGACTTGCATATCTGCATGGAAGAAACACAGTGCACCGGGATATCAAAGGGGCAAACATACTAGTTGACCCTAATGGCGAAATTAAGTTGGCGGACTTTGGAATGGCTAAACATATAAATTCTTCTACCTCCATGCTTTCTTTCAAGGGAAGTCCATATTGGATGGCACCTGAGGTTGTTATGAATACAAATGGCTACAGTCTTGCTGTGGATATATGGAGCTTGGGATGCACAATTCTGGAAATGGCGACGTCAAAACCTCCATGGAGTCAGTATGAAGGGGTAGCTGCTATATTTAAAATTGGGAACAGCAAGGATATGCCTGAAATCCCAGAGCATCTTTCATGTGATGCCAAGTCTTTCATACAGCTATGCTTACAAAGAGATCCATCAGCTCGCCCAGCTGCTCACAGGCTGCTAGAGCATCCCTTTATTCGTGATCAATCAGCGACAAGAGCTGCCAATGTCAGCTTAACCAGAGATGCTTTCCCCTACATGTTTGACGGAAGTCGGACGCCGCCACATGTAGAGCCTCATTCCAGTAGAACAAATATGACGTCAGTGGATGGAGATTATGGAACAAAGCCAACTTTTTCAACTTCACGAGCATTAAGGAGCCCAAGAGAGAACGCAAGAATGATTACATCTTTACCGGTATCACCCTGCTCAAGTCCATTGCGGCAATATGGATCATCAGCATACAAGAGCTGTATGCTTTCTCCTCCACATCCAACTTTCACCTCGGTGGGACAAAATACCTACAACTTTAGCGATCTCTCATCATATCCTGTGAGATCAAACGCCACCTTCACATTAGATCCTTGGAACGAGAGATCTCTATATAACGCCCATACGCCTGGCGGGTCCCCGAGGAGGAGACTCATTTGA 1941 0.4673 MPAWWGRKSSKNKEEQRQQQQLPPAESHGGIQFNFIKSPIRNVAKKGRDKPKSFDEVSAAIISRSSPRTSRDFTPAAAAAAPVGGSSSGFSCLDSDGCEKVGHPLPRPSISSPQSFGNDQGDGDGLGSASISGSSVSSSGSYDHHPISQLDGIRGRSEMRINMRSKSPGPGSRGPTSPTSPLHPRLHVLSIDSPTGKQDDGRSECHPLPLPPGSPTSPSALSNAKANSLVENTTNNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVFSDDQTSKECLKQLNQEINLLSSFSHPNIVEYYGSDLGEDALSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYVRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSCDAKSFIQLCLQRDPSARPAAHRLLEHPFIRDQSATRAANVSLTRDAFPYMFDGSRTPPHVEPHSSRTNMTSVDGDYGTKPTFSTSRALRSPRENARMITSLPVSPCSSPLRQYGSSAYKSCMLSPPHPTFTSVGQNTYNFSDLSSYPVRSNATFTLDPWNERSLYNAHTPGGSPRRRLI 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00275 646 Pfam Protein kinase domain 241 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00275 646 MobiDBLite consensus disorder prediction 527 551 - -
Accr12g00275 646 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 63 505 - -
Accr12g00275 646 SMART serkin_6 240 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00275 646 MobiDBLite consensus disorder prediction 62 225 - -
Accr12g00275 646 FunFam Mitogen-activated protein kinase kinase kinase 238 520 - -
Accr12g00275 646 MobiDBLite consensus disorder prediction 1 34 - -
Accr12g00275 646 MobiDBLite consensus disorder prediction 108 145 - -
Accr12g00275 646 CDD STKc_MEKK1_plant 239 496 - -
Accr12g00275 646 SUPERFAMILY Protein kinase-like (PK-like) 237 579 IPR011009 -
Accr12g00275 646 ProSiteProfiles Protein kinase domain profile. 240 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00275 646 Gene3D Transferase(Phosphotransferase) domain 1 237 517 - -
Accr12g00275 646 ProSitePatterns Protein kinases ATP-binding region signature. 246 269 IPR017441 GO:0005524
Accr12g00275 646 MobiDBLite consensus disorder prediction 522 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00275 Accr-Chr12 2564845 2570066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00275 1 559 MAP Kinase Kinase Kinase AT1G53570 56.217 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr12g00275 Pkinase 2.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00275 K04421 - qsa:O6P43_030333 894.804