Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00272 ATGGCGAAAACGAAACTGATACCTGGATTTCGGTTTCATCCTACCGACGTTGAGCTGGTTGAGTACTTTTTGAAGAGGAAGGTCATCGGAAAAAAGTTTCCCCTTCAAGTGATCGCCGAACTCGAAGTATACAAATATGCTCCGTGGGATCTTCCAGATAAATCGATAATGAGCACTGTGGACTTGGAATGGTACTTCTTTTGCCCTAGATCAAAGAAAAACATGACTGGAGGTAGAACGAATAGGAGTACGGAAGCAGGATACTGGAAAACCACAGGAAGGGACAAACCTATTTGGCATAAGAATCAAAGTGTTGGGTTGATGAAAGTTCTAGTTTTTCATGCGGGTCGTCCACCTAGAGGAGATCGAACTGATTGGGTTATGCATGAATTTAGGCTTCATGATGATAAGGATCTCGGTGACAAAGGCATCGCACAGGACTCGTCGTATGTTCTTTGTAGGGTGTTCAAGAAGGATGGACGTGGTCCTAGGAATAATGGACGAAAATATTGTGAACTGTTTGACGAGGAAAACTGGGATGACGAGGAAGATTCTACTTCTATTGCTGATCATGAACCATCACTTCGTGTTCTGCCTGGTATTGCACATAACAACAACAACAACAATCTCTCGCCATGTGAGTTCAATTGGTCGCCGACCCCAAAGTCTAGTTTGTCATCAGGAACGACTTATGATCCTTCAGTAGTGAATAAAGACAATGTTGTTTCTCCAATTCCACGTGAGGAGGACGATGTGCTATGCTTGTTGGATTCGTGCTCAGAAGAAGAAATACACAACAGGTTGGCTCTAAGTAATGAAGACCACAATATCGAGGCGGGTGTTAATTCTGCGGAGGAAAAGGAAAGTGAAAGATTTCCATTTGATGATATATTTAGGGACTTGGAAGAACTCACCAACTTGGCGGCATTGGATAATGAAGATTATGGTCTCACACAAGTTGGATTTCCTACAAACCCAAGTTAA 984 0.4278 MAKTKLIPGFRFHPTDVELVEYFLKRKVIGKKFPLQVIAELEVYKYAPWDLPDKSIMSTVDLEWYFFCPRSKKNMTGGRTNRSTEAGYWKTTGRDKPIWHKNQSVGLMKVLVFHAGRPPRGDRTDWVMHEFRLHDDKDLGDKGIAQDSSYVLCRVFKKDGRGPRNNGRKYCELFDEENWDDEEDSTSIADHEPSLRVLPGIAHNNNNNNLSPCEFNWSPTPKSSLSSGTTYDPSVVNKDNVVSPIPREEDDVLCLLDSCSEEEIHNRLALSNEDHNIEAGVNSAEEKESERFPFDDIFRDLEELTNLAALDNEDYGLTQVGFPTNPS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00272 327 ProSiteProfiles NAC domain profile. 6 158 IPR003441 GO:0003677|GO:0006355
Accr12g00272 327 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Accr12g00272 327 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Accr12g00272 327 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 227 - -
Accr12g00272 327 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00272 Accr-Chr12 2537223 2539249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00272 1 184 NAC Transcription Factor Family AT5G64060 59.239 2.44e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr12g00272 NAM 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00272 - - adu:107470479 276.944