Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00265 ATGGATATCAACCAAAACCCTACAATGTTCACAAGCGTTAACAACACTACCATTTGGAATAATCTGAACAACATGGAAGTGGATCACAATCTCCATCCTCTTCATCATCAAATCCCTATGTGTTCCTCTTGGCCTAATTACCCTCATCAGATCATACCTTCTTCTTCTTCTTCCTCTACCGCAGTACCCTCTCCAGGGTTTCTAAACAACGTCGTTTTGGAAGAAGAAGATGAAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAGCTGGGAGCTGTGAAGGAGATGCTGTACAAGATCGCGGTTATGCAGCCGGTGGACATAGACCCGGCCACCATCCGAAAGCCGAAGAGACGAAACGTCAGAATCAGCGACGATCCACAAAGCGTCGCCGCCAGACACCGGCGAGAGAGGATCAGCGAGAAGATCCGAATCCTCCAAAGACTTGTCCCTGGTGGCACCAAGATGGACACTGCCTCCATGCTTGATGAAGCCATTCGCTATGTCAAGTTCTTAAAGCGACAAATTAGGCTTCTCCGATCTCAACCACCACCACCACTACAACAATGCATCACTAATAACAATACACTTGCCAATATTGGTGTTATCAGCACTGTTAGTACTAATATCCATACTGATCATTGGCCTTATGCACCACCGTCGTCTTTACTACACTGTCCCACCGCCAGCTCCTCCGCTGCTGCTGCCATGGGCATGCCGGTCAGACGAGGACTCGGCTCGGGCTATAATCATGAGTGA 756 0.4841 MDINQNPTMFTSVNNTTIWNNLNNMEVDHNLHPLHHQIPMCSSWPNYPHQIIPSSSSSSTAVPSPGFLNNVVLEEEDEEGEGEGEEEELGAVKEMLYKIAVMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLRSQPPPPLQQCITNNNTLANIGVISTVSTNIHTDHWPYAPPSSLLHCPTASSSAAAAMGMPVRRGLGSGYNHE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00265 251 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 28 200 IPR045843 GO:0003700|GO:0006355
Accr12g00265 251 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 171 IPR011598 GO:0046983
Accr12g00265 251 CDD bHLH_AtIND_like 123 181 - -
Accr12g00265 251 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 181 IPR036638 GO:0046983
Accr12g00265 251 SMART finulus 128 177 IPR011598 GO:0046983
Accr12g00265 251 Pfam Helix-loop-helix DNA-binding domain 132 171 IPR011598 GO:0046983
Accr12g00265 251 Coils Coil 161 181 - -
Accr12g00265 251 Gene3D - 125 194 IPR036638 GO:0046983
Accr12g00265 251 FunFam BHLH transcription factor 125 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00265 Accr-Chr12 2475053 2475808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00265 89 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 83.810 2.17e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr12g00265 HLH 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00265 - - gmx:100779374 214.542