Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00255 ATGGAATCCAAAGCCAAAAACGTTAGGGTAGGAGACTATATTCTGAAGACGAAAATCAGGGAAGGTTCTTTCTCCACAGTGTGGGGAGCCGAGCACGTGTTCAGCGGCGATGAAGTGGCAGTGAAACAAGTCTGCCTTTCCAGACTCAATCGACGCCTCAAGAGCTGCTTCGACTGCGAAATCGATTTCTTATCCTCTGTCAACCACCCTAATATAATTCGCCTTCTCGACGTCTTCCAGGAAGATGGATTTGTATACCTGGTCCTGGAGTTTTGTGCTGGAGGAAATTTGGCTTCTTACATTCAGCGCCATGGAAGGGTTCAACCACAAATTGCTAGAAAATTCATGCAGCATATTGGTTCCGCTTTAAAAATAATGCACTATCGGGGTATCATTCACAGGGACCTGAAACCAGAGAACATTTTGTTGTCGAGCCAAGGGGATGAGTCAGTGCTTAAGATTGCTGATTTTGGTCTATCAAGAACATTGCATCCAGGGGAATGTGCCGAGACCGTTTGTGGGTCTCCATTATACATGGCTCCTGAAGTTCTTCAATTCCAGAAATATGATGATAAGGCAGACATGTGGAGTGTTGGAGCCATTCTTTTTGAGCTTGTGAATGGCTATCCACCCTTCAATGGAAGGAATAATGTCCAGCTGTTGAAGAATATCAGATCCTGCACATGTCTTCCATTTTCTCAGCGAATCCTTTCAGCAGTAGACCCTGACTGTCTTGATATGTGTTCTAGGCTACTGTGCTTAAATCCAGAGGAGCGTCTATCGTTTGATGAATTTTATGGGCATAGGTTTCTCAGATAA 819 0.4444 MESKAKNVRVGDYILKTKIREGSFSTVWGAEHVFSGDEVAVKQVCLSRLNRRLKSCFDCEIDFLSSVNHPNIIRLLDVFQEDGFVYLVLEFCAGGNLASYIQRHGRVQPQIARKFMQHIGSALKIMHYRGIIHRDLKPENILLSSQGDESVLKIADFGLSRTLHPGECAETVCGSPLYMAPEVLQFQKYDDKADMWSVGAILFELVNGYPPFNGRNNVQLLKNIRSCTCLPFSQRILSAVDPDCLDMCSRLLCLNPEERLSFDEFYGHRFLR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00255 272 PIRSF ILK 1 238 - -
Accr12g00255 272 SMART serkin_6 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00255 272 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 4 271 IPR045269 GO:0004674|GO:0006914
Accr12g00255 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Accr12g00255 272 SUPERFAMILY Protein kinase-like (PK-like) 8 272 IPR011009 -
Accr12g00255 272 Gene3D Transferase(Phosphotransferase) domain 1 3 272 - -
Accr12g00255 272 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00255 272 ProSiteProfiles Protein kinase domain profile. 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00255 272 FunFam Maternal embryonic leucine zipper kinase 4 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00255 Accr-Chr12 2305340 2307222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00255 11 264 CBL-interacting serine-threonine protein kinases AT2G30360 37.308 1.02e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Accr12g00255 Pkinase 6.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00255 - - lja:Lj1g3v1289070.2 411.379