Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00254 ATGGCTGGCTTAGTTGCATCAAACATGGAATCCAAAGCCAAAAACGTTAGGGTAGGAGACTATATTCTGAAGACGAAAATCAGGGAAGGTTCTTTCTCCACAGTGTGGGGAGCCGAGCACGTGTTCAGCGGCGATGAAGTGGCAGTGAAACAAGTCTGCCTTTCCAGACTCAATCGACGCCTCAAGAGCTGCTTCGACTGCGAAATCGATTTCTTATCCTCTGTCAACCACCCTAATATAATTCGCCTTCTCGACGTCTTCCAGGAAGATGGATTTGTATACCTGGTCCTGGAGTTTTGTGCTGGAGGAAATTTGGCTTCTTACATTCAGCGCCATGGAAGGGTTCAACCACAAATTGCTAGAAAATTCATGCAGCATATTGGTTCCGCTTTAAAAATAATGCACTATCGGGGTATCATTCACAGGGACCTGAAACCAGAGAACATTTTGTTGTCGAGCCAAGGGGATGAGTCAGTGCTTAAGATTGCTGATTTTGGTCTATCAAGAACATTGCATCCAGGGGAATGTGCCGAGACCGTTTGTGGGTCTCCATTATACATGGCTCCTGAAGTTCTTCAATTCCAGAAATATGATGATAAGGCAGACATGTGGAGTGTTGGAGCCATTCTTTTTGAGCTTGTGAATGGCTATCCACCCTTCAATGGAAGGAATAATGTCCAGCTGTTGAAGAATATCAGATCCTGCACATGTCTTCCATTTTCTCAGCGAATCCTTTCAGCAGTAGACCCTGACTGTCTTGATATGTGTTCTAGGCTACTGTGCTTAAATCCAGAGGAGCGTCTATCGTTTGATGAATTTTATGGGCATAGGTTTCTCAGATAA 843 0.4448 MAGLVASNMESKAKNVRVGDYILKTKIREGSFSTVWGAEHVFSGDEVAVKQVCLSRLNRRLKSCFDCEIDFLSSVNHPNIIRLLDVFQEDGFVYLVLEFCAGGNLASYIQRHGRVQPQIARKFMQHIGSALKIMHYRGIIHRDLKPENILLSSQGDESVLKIADFGLSRTLHPGECAETVCGSPLYMAPEVLQFQKYDDKADMWSVGAILFELVNGYPPFNGRNNVQLLKNIRSCTCLPFSQRILSAVDPDCLDMCSRLLCLNPEERLSFDEFYGHRFLR 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00254 280 SMART serkin_6 21 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00254 280 SUPERFAMILY Protein kinase-like (PK-like) 15 280 IPR011009 -
Accr12g00254 280 ProSiteProfiles Protein kinase domain profile. 21 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00254 280 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00254 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Accr12g00254 280 FunFam Maternal embryonic leucine zipper kinase 12 280 - -
Accr12g00254 280 Gene3D Transferase(Phosphotransferase) domain 1 11 280 - -
Accr12g00254 280 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 11 279 IPR045269 GO:0004674|GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00254 Accr-Chr12 2305316 2307222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00254 19 272 CBL-interacting serine-threonine protein kinases AT2G30360 37.308 1.01e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Accr12g00254 Pkinase 7.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00254 - - lja:Lj1g3v1289070.2 411.379