Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00243 ATGGAAGGAAACAAGCCCTATGTGGTTGTGCTCATAGTTCAGGCAATTTATGCCGGCATGTTCCTTCTCTCTAAAGCTGCCTTCGACCATGGCATGAACAATTTCATCTTCGTCTTTTACAGACAAGCCGCTGCCACTATTTTCCTCGCCCCTTTCGCTTTCTTCTTCCAACGCAAAACTGCACCGCCTTTGTCGTTCGTGACCTTCTGCAAGATATTCTTTCTTTCCTTCTTGGGGATAACCATGAGCTTGGACATCTATGGGATTGCCCTTGTTTACACCTCTGCGACTTTAGCTGCTGCCACGACTAACTGCCTTCCCGTCATCACTTTTTTCTTGGCCCTTCTACTCAGGATTGAAAGTCTGAAAGTGAAAACAGCACCTGGGATTGCAAAGTTAGTAGGTGTAGTGGTATGTTTGGGTGGTGCAGCAACACTTGCCTTTTACAAAGGACCTCACTGGCAACTTTTGGGGAATCATCACCTTTTGGGATATACTCATAGTAATTCCAATGCAAAAGCTCATAATAGTGTTCAATCTGGCACCTGGATAAAGGGTTGCTTCCTCATGCTCCTCTCCAACACCTGCTGGGGGATGTGGCTCGTACTGCAGGCCTTTGTTATTAAAGAGTATCCTTCAAAGTTGCTTCTCACAACCCTACAGTGTTTCTTAAGCTCAATTCAGTCTTTTGCTATTGCCTTTGCCGTGGAAAGGGACATTGAACAATGGAAGCTAGGTTGGAATGTCAGGCTTCTTGCCGTAGCTTACTGTGGAATAATGGTAACGGGGGTGACATTTTACTTGCAAGCCTGGATTATAGAGAAGAAAGGACCCGTGTTTTTGGCCATGTCCACTCCACTGGCTCTCATCATGACCATTTTCTCATCAGCATTTCTGTTAGGCGAGATCATAAGTTTAGGAAGCCTATTAGGAGGGTTGATACTGGCAATAGGACTATACAGTGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCCAAAGCCTCATCGCTTGACGTAGAGGTGGCTTCGATCGGGAGTGTGATCACACGCTAA 1053 0.4606 MEGNKPYVVVLIVQAIYAGMFLLSKAAFDHGMNNFIFVFYRQAAATIFLAPFAFFFQRKTAPPLSFVTFCKIFFLSFLGITMSLDIYGIALVYTSATLAAATTNCLPVITFFLALLLRIESLKVKTAPGIAKLVGVVVCLGGAATLAFYKGPHWQLLGNHHLLGYTHSNSNAKAHNSVQSGTWIKGCFLMLLSNTCWGMWLVLQAFVIKEYPSKLLLTTLQCFLSSIQSFAIAFAVERDIEQWKLGWNVRLLAVAYCGIMVTGVTFYLQAWIIEKKGPVFLAMSTPLALIMTIFSSAFLLGEIISLGSLLGGLILAIGLYSVLWGKSREQMPKASSLDVEVASIGSVITR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00243 350 PANTHER WAT1-RELATED PROTEIN 5 331 IPR030184 GO:0016020|GO:0022857
Accr12g00243 350 Pfam EamA-like transporter family 6 133 IPR000620 GO:0016020
Accr12g00243 350 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Accr12g00243 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 328 - -
Accr12g00243 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00243 Accr-Chr12 2228998 2232055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00243 1 257 Nodulin-like Gene Family AT5G64700 64.729 2.82e-105 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00243 - - gmx:100775854 526.168