Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00242 ATGGGTGAGTATAAGCCATATTTGGGAATGGTTCTGATACAAGTCATATATTCAGGGATGATATTGTTATCTAAGGCAGCATTCAATGAAGGGATGAACTGCAGTGTGTTTATCTTTTATAGGCAACTGGTTGGAACTATTATTTTGGTCCCTTTAGCCTTCATATTTGAACGAAAAAGTTCAGTGCCACTCTCGTTTTCGATCTTCTGCAAGATCTTCTTGCTCTCATTTTTAGGGGTTACTGTGTCTCTGAATGTGTATGCCATTGCACTTGTTTATACATCTGCCACATTGGGTGCTGCAACTGTTAGTAGCCTACCGGTTTTCACTTTCTTCTTCGCGGTCCTGTTCAGGATGGAGAAGGTGAAGATAAGGACAAAACCTGGAGTTATAAAGATATCAGGTCTTGTAGTGTGTTTGTGTGGGGTAGCCGCCCTTGCGTTTTACAAGGGACCCCAGATATGGCCCCTTCATCCTATTCTGTCTGCAAATCACAACGCTCAACATCTTCAACATGATCATTCTTCCTATTGCAAAAGATGGTATTTGGGTTCTTTACTCTTGTTCTGTGCCATCATCACCTGGAGCATGTGGCTTGTTCTTCAGGCCCGGTTTCTCAAAAGCTACCCTTCAAAACTAAAATTCACAAGCCTTCAGTGCCTTTTGAGTGCAATTCAGTCATTTTGTATTGCTATTGCTTCGGAAAGAGATATGAAAGAGTGGAAGCTAGGTTGGAACATGGGACTACTTGCTATTCTTTACTGTGGAATAATGGTGACTGGGATTACCTACTACTTACAAGCTTGGGTAATTCAGAAGAAAGGGCCACTATTCCCTGCAATGTGGAACCCACTCAATTTTATGATTACCATTATTGGTTCCATGTTTTTGCTCAATGAGTCCATCAATTTAGGCAGCTTTCTTGGTGGGATTCTGTTGGTTCTAAGTCTGTACAGTGTTCTGTGGGCAAAGAGCAAAGAAGGGATAAGTAGTGATGACGTTTGTTTACCAGTTCAAGCACAGAAAGAATGTGCAGATCAAAGTGAAAGAAGCATGGGCAAGCCTTAG 1068 0.4167 MGEYKPYLGMVLIQVIYSGMILLSKAAFNEGMNCSVFIFYRQLVGTIILVPLAFIFERKSSVPLSFSIFCKIFLLSFLGVTVSLNVYAIALVYTSATLGAATVSSLPVFTFFFAVLFRMEKVKIRTKPGVIKISGLVVCLCGVAALAFYKGPQIWPLHPILSANHNAQHLQHDHSSYCKRWYLGSLLLFCAIITWSMWLVLQARFLKSYPSKLKFTSLQCLLSAIQSFCIAIASERDMKEWKLGWNMGLLAILYCGIMVTGITYYLQAWVIQKKGPLFPAMWNPLNFMITIIGSMFLLNESINLGSFLGGILLVLSLYSVLWAKSKEGISSDDVCLPVQAQKECADQSERSMGKP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00242 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 325 - -
Accr12g00242 355 Pfam EamA-like transporter family 6 145 IPR000620 GO:0016020
Accr12g00242 355 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020
Accr12g00242 355 PANTHER WAT1-RELATED PROTEIN 5 328 IPR030184 GO:0016020|GO:0022857
Accr12g00242 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00242 Accr-Chr12 2221272 2223749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00242 1 255 Nodulin-like Gene Family AT5G64700 54.231 9.30e-81 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00242 - - qsa:O6P43_023324 455.292