Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00240 ATGGCGAGATCACCTGAATGTGAGCATCCACAGAAGGCTTTTGGCTGGGCTGCCAGGGATACTTCTGGCCATCTTTCTCCTTTTCCCTTCTCGAGAAGGGAAGTTGGGGCTGACGACGTTGCTTTGAAAATTCTGTTTTGTGGGGTTTGCCATTCGGATCTGCATACTGTTAAGAACGATTGGGGTTTCACAACTTACCCTGTTGTTCCCGGACATGAAATTGCTGGCGTTGTTACACAAATTGGGAATAATGTGAAAACATTCAAAGTGGGTGACAGAGTTGGAGTTGGTGTCATGGCGGATTCCTGCAAAACATGTGATGCTTGCGAGCAGGACCTGGAGAATTACTGTCCTAAAAAAGTATTTACCTATAACAGCCCTGGCTATGACGGGACGAGAACCTATGGAGGATATTCTGATTTTGTGGTTGTTCACAAGCGGTTTGTGCTCAGATTTCCTGAGAACTTACCCCTTGATGCTGGTGCTCCACTTCTCTGTGCTGGAATTACTGTGTACAGTCCAATGAAATATTATGGAATGACAGAGCCAGGTGGACATTTGGGAGTGGCAGGGCTTGGTGGGCTAGGTCATGTTGCTGTGAAAATTGCTAAGGCCTTTGGGCTGAAAGTTACTGTCATTAGCACCTCTCAAAAAAAGGAAGTTGAGGCTATCAACAGGCTTGGGGCCGATTCCTTTCTTGTTTCCACGGACTCTGGAAAAATGAAGGCAGCTATGAAAAGCATGGACTTCATCATTGACACAATTTCTGGAGTTCATTCCCTCCTTCCTCTTCTTGGTCTGCTGAAATTAAACGGGAAGCTGATCACCGTGGGGTTGCCTGAGAAACCCTTAGAGCTACCTATCTTTCCTCTAGTTGCAGAACGGAAGCTTGTGGGAGGAAGTGACTTCGGAGGAATAAAAGAGACGCAGGAGATGCTGGAGTTTTGTGGGAAGCACAACATCAGTGCAGATATAGAGCTGATTAGGTTGGACGAAATCAATACTGCCATGGAAAGGCTGGCCAAGTCTGACGTCAAGTATCGCTTTGTGATCGACGTGGCCAACTCCTTAAGAGGGTAG 1080 0.4676 MARSPECEHPQKAFGWAARDTSGHLSPFPFSRREVGADDVALKILFCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGVVTQIGNNVKTFKVGDRVGVGVMADSCKTCDACEQDLENYCPKKVFTYNSPGYDGTRTYGGYSDFVVVHKRFVLRFPENLPLDAGAPLLCAGITVYSPMKYYGMTEPGGHLGVAGLGGLGHVAVKIAKAFGLKVTVISTSQKKEVEAINRLGADSFLVSTDSGKMKAAMKSMDFIIDTISGVHSLLPLLGLLKLNGKLITVGLPEKPLELPIFPLVAERKLVGGSDFGGIKETQEMLEFCGKHNISADIELIRLDEINTAMERLAKSDVKYRFVIDVANSLRG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00240 359 Gene3D - 16 353 - -
Accr12g00240 359 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0016616
Accr12g00240 359 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Accr12g00240 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Accr12g00240 359 CDD CAD1 14 352 IPR047109 GO:0016616
Accr12g00240 359 FunFam probable cinnamyl alcohol dehydrogenase 16 175 - -
Accr12g00240 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Accr12g00240 359 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Accr12g00240 359 SMART PKS_ER_names_mod 20 351 IPR020843 GO:0016491
Accr12g00240 359 Gene3D - 167 323 - -
Accr12g00240 359 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Accr12g00240 359 SUPERFAMILY GroES-like 20 184 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00240 Accr-Chr12 2189698 2194460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00240 11 357 Monolignol Biosynthesis Gene Families AT2G21730 71.920 0.0 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00240 K00083 - gmx:100819684 583.178