Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00227 ATGAAACCCCTCTCCCCCCCAAACTATCATCGTTCTTTCTTCCTCTTATTCTCGTTAACTCTTCTCTCCCTACAGCCTCCTCCCTCATCCTCTGCTTCTTCTTCTTCAGCTTTCATAGACCAAACTCACCAGCTTCTCAACTTCAAGAATTCCCTCCCTGACCCCTCCGTACTCCATAACTGGCTCCCTAATCACAATCCCTGTTCATTCATTTGGGTTTCTTGCCGGGATACCCTCGTTTCTTCCATAGACCTCGGCTTTGTCCCCTTGAACACTAATTTCAGCCTTGTCTCAACCTATCTTCTCACCCTCGACCACCTTCAAGTTCTTAGTCTGCCAAGCACCAATCTTTCCGGCACCATTTCTTTCTCGGCTGGCTTCAGGTGTAGCAGCTCATTGAGCTCCTTAGATCTGTCTCAGAACACTTTGTCTGGTTCCGTTTCGTCCTTGAACTATTTGTCCTCTTGTTCGGCCCTGAAGTCTCTCAATCTTTCAGGTAACCTCCTAGAATTTTCAGGGAGAGATTCAGCCGGGTTGAGGCTCAGTCTCCAGGTCCTCGATCTTTCCTACAACAATAAGATTTCGGGTCCCAACGTTCTCTCATGGATCTTATCACAGGGCTGCGACGGCTTGAAGCTCTTGTCTCTAAAGGGCAACAGAATCACAGGGGAAATGAACTTTTCCACTTGCAAAGCTTTGCAGCATCTGGACCTTTCCTCTAATAATTTCTCTCTCGCTGTTCCTTCTTTTGGTGAGTGTCTTGCTTTAGAGTACCTCGACATATCTGCTAATAAGTTTTACGGTGACATTGGTCGCGCCATCTCCAGTTGCAAGCTGCTCAGCTACTTGAACATCTCGTCCAACGAGTTCGTCGGTCCGGTTCCTTCACTTCCGTCCGGTTCTCTACAGTTCTTATATCTTGCCAACAACCATTTCCAGGGACAGATTCCTGCTAGCCTTTCTGACTTGTGCCCTACCCTGGTGGTACTCGATCTTTCCTCAAACAACCTTTCCGGTGTGCTTCCGAGCGATTTCAGGGCTTGTTCTTCATTGGAATCTTTTGATATATCTCACAACAAGTTCACCGGCGAGCTTCCGGTTGATTTTTTCGCAGAATTGATTGGCTTGAGGAGGCTAGTTCTTTCCTTTAATGATTTCACGGGTACACTTCCTGATACCCTGTCTCAGTTCTCGAAATTGGAGTCATTGGATCTGAGCTCTAATAACCTGACTGGCTCAATTCCTGGAGGGCTGTGTGAAGATCCGAGGAATAACTTGAAAGAATTATACCTGCCGAATAATCTGTTGACGGGTTCTATTCCACCCACACTCAGCAACTGTTCGCAGCTTGTGACTTTGGATTTGAGTTTCAACTACTTGACGGGGACTATCCCTTCCAGCTTTGGGTCCCTTTCAAAACTCAAAGATTTGATTCTTTGGCTGAACCAGCTACATGGAGAAATACCCCAAGAGCTTGAGCACATTAAGACTCTAGAGAATTTGATTCTGGACTTCAATGAGCTGTCTGGGACCATCCCTTCTGGCTTAAGCAACTGCACCGGCTTGAATTGGTTATCCTTGTCTAATAACAGGTTGAGTGGTGAGATTCCGGCATGGATTGGTCAGCTTTCAAATCTTGCGATCTTGAAATTGAGTAATAACTCCTTCTCTGGGAGGATTCCGCCGGAGCTTGGGGATTGTCAAAGATTGATATGGTTGGATCTGAATACTAATTATCTGAATGGATCAATTCCTACTGAGTTATTTAAGCAGTCGGGCAAAATTGAAGTTAATTTCATCAGTCGAAAGACATATGTGTACATCAAGACTGACGGTAGTAAGCAGTGCCATGGAGCAGGAAATTTGCTAGAGTTTGCTGGTATTAAAATGGAGCAGATGAGCAGAATTTCATCCAGGAGCCCTTGCAATTTCACTAGCTTCACTAGAGTTTATAATGGTAAGGTCCGTCCCAAGTTTGATAGTGGTTCTATGATTTTTTTGGACATTTCACATAATATGTTGTCGGGTACTCTTCCCAAGGAGATGGGGAGTCTGAACACTGTATTTATTTTGAACTTGGGATACAACGATATATCTGGGAGCATCCCACCGGAATTTGGAGACATGAAAAATCTCAACATTCTTGATCTCTCCAACAATAGGCTTGAAGGACAGATTCCTCAAACCTTGACAGGCATTTCCATGCTCACGGAAATTGATTTGTCAAACAACAATCTCTCAGGATTGATTCCTGAATCTGGTCAATTTGATACCTTTCCAGCTGCCAAATTTGCAAATAATTCTGGTCTCTGTGGTGTCCCTCTTGTTGCATGTGGATCAGACTCGAGATCAGATGCAAATGCCCGGCATCAGAGGTCTGACCAGAGACGGGCATCTCTGGCAAGGAGTGTGTCCATTGGTTTGCTGTTCGCCCTTTTTTGCATCCTTGGTTTCGTCATAATCGCCTTCGAGGCAAGAAAGAGGAGGAAGAAGAAGGAGGCTACTTTGGACGTCTACATCGACAGCCGGTCTCACTCAGGTACAGCTAATGCCGGTTGGAAGTTGAGTGCCCGTGAAGCTCTTAGCATAAATCTTGCGACTTTTGAGAAGCCCCTTCGGAAGCTTACTTTTGGGGATCTTCTTGAAGCCACGAATGGTTTCCACAATGACAGTCTTATTGGTAAAGGTGGTTTTGGAGATGTATACAAGGCTCAGTTGAAAGATGGAAGTGTAGTGGCGATCAAGAAACTGATTCATATCAGCGGACAAGGGGACAGGGAGTTCACTGCTGAAATGGAAACAATTGGGAAAATTAAGCATCGGAACCTTGTTCCCCTTCTTGGATACTGCAAAGTTGGAGAAGAAAGACTCTTGGTTTATGAATACATGAAATATGGAAGCCTAGAGGATGTTTTGCATGATCCAAAGAAATCCGGGATGAAGCTGAACTGGGCAGCCAGGAGGAAGATTGCAATTGGAGCTGCTAGGGGATTGGCTTTTCTTCACCACAACTGCATTCCTCACATCATTCACAGAGACATGAAATCAAGCAATGTGTTGCTTGATGCGAATCTGGAAGCTAGAGTCTCCGATTTTGGAATGGCTAGGCTTATGAGTGCTATGGATACCCATTTAAGTGTCAGCACACTAGCAGGAACCCCTGGTTATGTTCCTCCCGAATACTACCAGAGCTTTAGATGCTCCACTAAAGGTGATGTTTATAGTTACGGTGTAGTTTTATTGGAGCTACTGACAGGGAAACGGCCCACAGATTCATCAGACTTTGGTGATAACAATCTCGTGGGATGGGTTAAACAGCATGCTAAATTAAAAATAAGTGATGTTTTTGACCCCGAGATCATGAAAGAGGATCCGAGTCTTGAGATTGAGCTTTTACAACACTTAAGAGTTGCTTCTGCTTGTCTTGATGATCGACCTCTGAGGCGTCCCACAATGATTCAAGTGATGGCAATGTTTAAGGAAATCCAAGCAGGATCTGGGATGGATTCCCAGTCTACCATCACGAGTGAGGATGGCGGTTTCGGCGCCATGGAAATGGTAGATATGAGCATACAAGGAATTCCAGAATTAAGCAGCAAGCAGTAG 3606 0.4501 MKPLSPPNYHRSFFLLFSLTLLSLQPPPSSSASSSSAFIDQTHQLLNFKNSLPDPSVLHNWLPNHNPCSFIWVSCRDTLVSSIDLGFVPLNTNFSLVSTYLLTLDHLQVLSLPSTNLSGTISFSAGFRCSSSLSSLDLSQNTLSGSVSSLNYLSSCSALKSLNLSGNLLEFSGRDSAGLRLSLQVLDLSYNNKISGPNVLSWILSQGCDGLKLLSLKGNRITGEMNFSTCKALQHLDLSSNNFSLAVPSFGECLALEYLDISANKFYGDIGRAISSCKLLSYLNISSNEFVGPVPSLPSGSLQFLYLANNHFQGQIPASLSDLCPTLVVLDLSSNNLSGVLPSDFRACSSLESFDISHNKFTGELPVDFFAELIGLRRLVLSFNDFTGTLPDTLSQFSKLESLDLSSNNLTGSIPGGLCEDPRNNLKELYLPNNLLTGSIPPTLSNCSQLVTLDLSFNYLTGTIPSSFGSLSKLKDLILWLNQLHGEIPQELEHIKTLENLILDFNELSGTIPSGLSNCTGLNWLSLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCQRLIWLDLNTNYLNGSIPTELFKQSGKIEVNFISRKTYVYIKTDGSKQCHGAGNLLEFAGIKMEQMSRISSRSPCNFTSFTRVYNGKVRPKFDSGSMIFLDISHNMLSGTLPKEMGSLNTVFILNLGYNDISGSIPPEFGDMKNLNILDLSNNRLEGQIPQTLTGISMLTEIDLSNNNLSGLIPESGQFDTFPAAKFANNSGLCGVPLVACGSDSRSDANARHQRSDQRRASLARSVSIGLLFALFCILGFVIIAFEARKRRKKKEATLDVYIDSRSHSGTANAGWKLSAREALSINLATFEKPLRKLTFGDLLEATNGFHNDSLIGKGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKSGMKLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDANLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSSDFGDNNLVGWVKQHAKLKISDVFDPEIMKEDPSLEIELLQHLRVASACLDDRPLRRPTMIQVMAMFKEIQAGSGMDSQSTITSEDGGFGAMEMVDMSIQGIPELSSKQ 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00227 1201 Gene3D Transferase(Phosphotransferase) domain 1 963 1164 - -
Accr12g00227 1201 FunFam serine/threonine-protein kinase BRI1-like 2 849 962 - -
Accr12g00227 1201 ProSiteProfiles Protein kinase domain profile. 887 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00227 1201 SMART serkin_6 887 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00227 1201 Pfam Leucine rich repeat 399 460 IPR001611 GO:0005515
Accr12g00227 1201 Pfam Leucine rich repeat 497 555 IPR001611 GO:0005515
Accr12g00227 1201 Pfam Leucine rich repeat 301 361 IPR001611 GO:0005515
Accr12g00227 1201 Pfam Leucine rich repeat 706 746 IPR001611 GO:0005515
Accr12g00227 1201 Gene3D Ribonuclease Inhibitor 45 778 IPR032675 -
Accr12g00227 1201 Gene3D - 598 661 - -
Accr12g00227 1201 CDD STKc_IRAK 893 1162 - -
Accr12g00227 1201 ProSiteProfiles Leucine-rich repeat profile. 399 421 IPR001611 GO:0005515
Accr12g00227 1201 SUPERFAMILY L domain-like 54 369 - -
Accr12g00227 1201 FunFam Leucine-rich repeat receptor protein kinase EMS1 513 603 - -
Accr12g00227 1201 ProSiteProfiles Leucine-rich repeat profile. 132 154 IPR001611 GO:0005515
Accr12g00227 1201 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 661 778 - -
Accr12g00227 1201 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 422 512 - -
Accr12g00227 1201 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 373 1158 - -
Accr12g00227 1201 ProSitePatterns Protein kinases ATP-binding region signature. 893 916 IPR017441 GO:0005524
Accr12g00227 1201 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1009 1021 IPR008271 GO:0004672|GO:0006468
Accr12g00227 1201 Pfam Protein kinase domain 887 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00227 1201 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 209 421 - -
Accr12g00227 1201 SUPERFAMILY Protein kinase-like (PK-like) 873 1164 IPR011009 -
Accr12g00227 1201 Gene3D Phosphorylase Kinase; domain 1 848 962 - -
Accr12g00227 1201 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Accr12g00227 1201 SMART LRR_typ_2 733 756 IPR003591 -
Accr12g00227 1201 SMART LRR_typ_2 543 567 IPR003591 -
Accr12g00227 1201 SMART LRR_typ_2 397 421 IPR003591 -
Accr12g00227 1201 SMART LRR_typ_2 324 347 IPR003591 -
Accr12g00227 1201 SMART LRR_typ_2 709 732 IPR003591 -
Accr12g00227 1201 SMART LRR_typ_2 373 396 IPR003591 -
Accr12g00227 1201 FunFam Brassinosteroid LRR receptor kinase 963 1164 - -
Accr12g00227 1201 SUPERFAMILY L domain-like 302 765 - -
Accr12g00227 1201 PRINTS Leucine-rich repeat signature 709 722 - -
Accr12g00227 1201 PRINTS Leucine-rich repeat signature 400 413 - -
Accr12g00227 1201 Pfam Brassinosteroid receptor island domain 593 659 IPR045381 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00227 Accr-Chr12 2047769 2051374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00227 12 1196 Receptor kinase-like Gene Family AT4G39400 67.950 0.0 1556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Accr12g00227 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00227 K13415 - qsa:O6P43_023302 1740.7