Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00226 ATGTCAACAACTACACGATCGATTTTGAACCATGGTGGTAACTTGTTCGAGGATCAGCAGTATGTGATGCACACACAGCTGGGGTTCCTTCCCAATTTCCCAGCAAATCTGACCTTTCCTTCTTTGGGCTGCCATCAATCTTTGAAGGGCTTCCAGAATACTATGGGTAGTCCTTCGCTTTCATCCGAAACAGCTTCTACCACTGCAAATCTAACCGAAACCCTATTTGCAGCCACAGCTCAAAAGCCAAGGCAAGACCTCGCTTCTAGCTTTGGAGGACCAACCCATCATCTCCTTTCCTTGAACGCATCAAGTGTACTCAATCCATGGGGATGGGGAGAAGTAAGCGAATGCTTAAGCAGTAAAAGAAATGGAGGAGAGAATGGTCATTGTCTAGGGATGTCGGCAATGAAGATGAAGAAGATAAAGGGAAGGAGGAAGGTGAGAGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATGTCGATGTCTTGGATGATGGCTATAAGTGGAGGAAGTACGGACAGAAGGTGGTCAAGAACACCCAACATCCCAGAAGCTACTATCGGTGCACACAAGACAACTGCCGCGTGAAGAAGAGAGTGGAACGCTTGGCGGAGGATCCGAGGATGGTAATAACAACGTACGAAGGGAGACACGCACACTCTCCTTCCAATGATCTTGAAGACTCGCAAGCTCCTTCTCAGCTTACTGATTTCTTGTGGTAG 726 0.4766 MSTTTRSILNHGGNLFEDQQYVMHTQLGFLPNFPANLTFPSLGCHQSLKGFQNTMGSPSLSSETASTTANLTETLFAATAQKPRQDLASSFGGPTHHLLSLNASSVLNPWGWGEVSECLSSKRNGGENGHCLGMSAMKMKKIKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEDSQAPSQLTDFLW 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00226 241 MobiDBLite consensus disorder prediction 226 241 - -
Accr12g00226 241 FunFam WRKY transcription factor 57 150 224 - -
Accr12g00226 241 SUPERFAMILY WRKY DNA-binding domain 156 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g00226 241 SMART WRKY_cls 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g00226 241 Gene3D WRKY domain 151 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g00226 241 MobiDBLite consensus disorder prediction 216 241 - -
Accr12g00226 241 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 224 IPR044810 GO:0003700
Accr12g00226 241 Pfam WRKY DNA -binding domain 165 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g00226 241 ProSiteProfiles WRKY domain profile. 159 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00226 Accr-Chr12 2041164 2042687 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00226 9 241 WRKY Transcription Factor Family AT4G39410 43.709 1.89e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr12g00226 WRKY 6.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00226 - - jcu:105636572 319.316