Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00225 ATGGGTCCCTTTACTCTGCCCATTATTGCTGAAGCCTCTTCCATATCATCTCCAGATGCTTGTTCCAAGAGGACGCAGAACTCATTGCTGAGAAAATCTTTTGCATCAATTAGCATGGGAGAGGAAAAGCAGGAAAATCCTTTTGATTTTCTACGCACTGTGTTTGAGGGCTTAGTTGCTGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCTATTGACACTATAAAGACACGCTTGCAGGCTGCCCGTGGAGGAGAAAAATTAGTGTTTGAAGGTCTTTATTCTGGATTGGCTGGAAATCTCGCTGGTGTCTTACCGGCTTCTGCTCTGTTCGTTGGAGTCTATGAACCTGTAAAGCAGACACTGTCGAGGATATTTCCAGAAAATCTGAGTGCTTTAGCTCATTTTACTGCAGGTGCCATAGGGGGCATTGCGGCTTCACTGATTCGTGTGCCAACCGAGGTTGTTAAACAACGAATCCAAACCGGGCAATTCACTTCGCCTGCTCTTGCTGTCCGCTATATTGCTTCTCTTGAGGGCATTAAAGGACTTTATGCTGGATATGGGTCTTTTCTGCTGCGTGATTTGCCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGCTTCGAATAGGTTATATGTTGGCGGCACGAAGAAATCTGAATGATCCAGAGAATGCCATTGTCGGTGCTTTCGCTGGTGCACTGACTGGCGCTATAACTACTCCTCTTGATGTCATTAAGACGAGGTTAATGGTTCAGGGAACTGCAAACCGATACAAAGGAATCTTGGATTGTGTTCAAACTGTCATCAAGGAAGAGGGACCTCAAGCTTTCCTGAAGGGCATTGGACCAAGGGTGCTATGGATAGGGATAGGTGGCTCAATCTTCTTCGGCGTTTTGGAGGGCACAAAGCGTATTCTAGCCGAGAGGCGTCCTAATCCTCCTCTTCCTCCTCCTCACAACTCTAACTCAAAGCTGAAGTGA 996 0.4618 MGPFTLPIIAEASSISSPDACSKRTQNSLLRKSFASISMGEEKQENPFDFLRTVFEGLVAGGTAGVVVETALYPIDTIKTRLQAARGGEKLVFEGLYSGLAGNLAGVLPASALFVGVYEPVKQTLSRIFPENLSALAHFTAGAIGGIAASLIRVPTEVVKQRIQTGQFTSPALAVRYIASLEGIKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYMLAARRNLNDPENAIVGAFAGALTGAITTPLDVIKTRLMVQGTANRYKGILDCVQTVIKEEGPQAFLKGIGPRVLWIGIGGSIFFGVLEGTKRILAERRPNPPLPPPHNSNSKLK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00225 331 Gene3D Mitochondrial carrier domain 56 318 IPR023395 -
Accr12g00225 331 SUPERFAMILY Mitochondrial carrier 54 305 IPR023395 -
Accr12g00225 331 Pfam Mitochondrial carrier protein 133 214 IPR018108 -
Accr12g00225 331 Pfam Mitochondrial carrier protein 53 126 IPR018108 -
Accr12g00225 331 Pfam Mitochondrial carrier protein 228 313 IPR018108 -
Accr12g00225 331 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Accr12g00225 331 PRINTS Mitochondrial carrier protein signature 188 206 IPR002067 GO:0055085
Accr12g00225 331 PRINTS Mitochondrial carrier protein signature 70 84 IPR002067 GO:0055085
Accr12g00225 331 PRINTS Mitochondrial carrier protein signature 57 70 IPR002067 GO:0055085
Accr12g00225 331 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 24 315 - -
Accr12g00225 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 310 IPR018108 -
Accr12g00225 331 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 56 320 - -
Accr12g00225 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 52 124 IPR018108 -
Accr12g00225 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 133 215 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00225 Accr-Chr12 2026523 2032201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00225 141 317 Chloroplast and Mitochondria Gene Families AT1G07030 32.258 6.79e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00225 K15111 - gmx:100811130 500.745