Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00222 ATGGACTACTATTTTGGAAACCCTAATTACTCACAATTCTCTGCTGCAAATCCATCTTCATCTGATCAGTTCATTTCGGATTATTTGGTGCTTGATAATGGTGTTGGGAACCAAGAATCCAGCTGGCCACACAGTACAGAATCATCGGAGAAGGCAACTAGCGATGCCAGCGGATTTATTGCTGCTACGAATGATGCTACCTCGTCCGAGAATAACAATATAAAATGCAAAAACGAGATCCAACGAAACAAGGAAGAGACGATGAGGCGAAGGATCGCTTTCAGGACCAGATCGGAGCTTGAGGTTATGGATGATGGGTACAAATGGAGGAAGTACGGAAAGAAGTCAGTGAAGAACAGTCCGAATCCAAGGAATTACTACAAGTGTTCGTACGGAGGATGCAGTGTGAAGAAGAGGGTGGAGAGGGACAGGAATGATTCAAGTTACGTGATAACAAGTTATGAAGGAGTTCACAACCATGAGATCCCAAGTTATCACTCTTCCTTCTTCCATCCTAATCCATGGCCCTTTCACTCTTCATCTAACTCATCATCTTCCTAG 561 0.4367 MDYYFGNPNYSQFSAANPSSSDQFISDYLVLDNGVGNQESSWPHSTESSEKATSDASGFIAATNDATSSENNNIKCKNEIQRNKEETMRRRIAFRTRSELEVMDDGYKWRKYGKKSVKNSPNPRNYYKCSYGGCSVKKRVERDRNDSSYVITSYEGVHNHEIPSYHSSFFHPNPWPFHSSSNSSSS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00222 186 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 178 IPR044810 GO:0003700
Accr12g00222 186 Pfam WRKY DNA -binding domain 104 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g00222 186 FunFam WRKY transcription factor 57 89 163 - -
Accr12g00222 186 SMART WRKY_cls 103 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g00222 186 SUPERFAMILY WRKY DNA-binding domain 95 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g00222 186 MobiDBLite consensus disorder prediction 36 71 - -
Accr12g00222 186 Gene3D WRKY domain 90 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g00222 186 ProSiteProfiles WRKY domain profile. 98 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00222 Accr-Chr12 2010531 2012008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00222 8 161 WRKY Transcription Factor Family AT5G64810 49.693 1.64e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr12g00222 WRKY 6.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00222 - - qsa:O6P43_023294 205.682