Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00188 ATGGCAGTCTCTGCTCTCCCCATCGCCACTGTAAATCCCACTGCCCTTCAAACCTCTACTGCTCCGAAGTTCACTCTCTCTTGTTCTCTTTCCTGTCATTCCAAGTCGTCTAAGCTTTCTTCGCCCTCCATTCCTGCAACTAGGAAAACACTCCTGGACATTGGTATCGGACTTGTAGCTGCCTCAGTCCTGGCCTTGACGCCCTTGGATGCCGATGCAACTAGAATCGAATATTACGCCACTGTGGGCGAACCTTTATGTGAGCTTAACTTTGCCAAGTCTGGACTCGGTTACTGCGATATGGTAGAAGGACCTGGGGACGAAGCCCCTCTCGGCGAGCTTATTAATGTTCACTACACTGCAAGATTTGCTGATGAGACTGTGTTTGATAGCAGCTACAAACGAGGTAGACCTCTCACCATGCGCATAGGTGTTGGTAAGGTTATCAAGGGGTTGGATCAGGGAATTTTGGGGGGTGAAGGAGTACCTCCAATGCGGATAGGCGGGAAACGCAAACTAAGAATTCCCCCACATTTAGCATACGGCCCAGAACCTGCGGGATGCTTTTCAGGTGACTGCAATATACCGGGCAATGCCACTCTTCTCTACGATATTAAGTTTGTTGGTATTTACTCTGGCAATGCAAAGTAA 651 0.49 MAVSALPIATVNPTALQTSTAPKFTLSCSLSCHSKSSKLSSPSIPATRKTLLDIGIGLVAASVLALTPLDADATRIEYYATVGEPLCELNFAKSGLGYCDMVEGPGDEAPLGELINVHYTARFADETVFDSSYKRGRPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRKLRIPPHLAYGPEPAGCFSGDCNIPGNATLLYDIKFVGIYSGNAK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00188 216 Gene3D - 85 210 IPR046357 GO:0003755
Accr12g00188 216 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 112 211 IPR001179 GO:0003755
Accr12g00188 216 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 1 216 IPR044183 GO:0009507
Accr12g00188 216 FunFam Peptidylprolyl isomerase 84 210 - -
Accr12g00188 216 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 109 207 IPR001179 GO:0003755
Accr12g00188 216 SUPERFAMILY FKBP-like 91 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00188 Accr-Chr12 1780795 1782304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00188 79 212 Calmodulin-binding Proteins AT5G48570 36.429 3.94e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00188 K01802 - vvi:100268058 314.694