Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00184 ATGGAAGACGTGGAGGTGGTGGTGGATGATATTGAGAAGAAGGGTGAAGAACCTAATGAAAGGTCTGAGTGGGTGCTGAATGCTCCTGAGCCTCCAAGTCCGTGGCATGTATTTGTGGGGTCAGTGAGCAACACCATTTCACAGTATCAAGAAAAGGCGTATGGTCTCAGAAGCCAATCCGGACCTAAACTTGTGCTTTCATTCCTTCAGGCCATTTTTCCTGTTCTTGACTGGGGTCGAAACTATACAGCCATAAGTTTCAGGAACGACTTACTTGCAGGTCTCACTGTTGCAAGTCTCTGTATTCCTCAGGGCATTGGGTATGCAACTTTAGCAAGGCTGGATCCTGAATATGGCCTCTATACAAGTGCGTTGCCGCCTCTTATCTATGCAATGATGGGAAGTTCAAGAGAGGTAGCAATTGGACCTGTGGCCGTGGTTTCATTGCTGTTGTCGTCAATGGTTCAGAAACTAACAGACCCTTCCACTGATCCATTGGGTTACACTAAGCTAGTTCTTACTGCCACTCTATTTGCCGGCATATTCCAGGCGGCCTTTGGACTCTTGAGGTTGGGGTTCTTGCTGGAATTTCTGTCGCATGCTGCTATTGTAGGATTCACGGCGGGAGCGGCCATTGTTATTGGACTTCAACAGCTGAAGGGCCTTTTTGGCTTCCAACGTTTTACCAACGAAACCGACGTCGTCTCTGTCACCATCTCCGTTCGCCAATCTCTTGATCATCCTTGGAATTACAGCAATTTAGTGCTGGGATGCTCGTTCCTCATTTTCATGCTTGCATGCAGATTTCTGAGTAAAAGGAACAGAAAACTGTTTTGGCTGCCAGCAATCTCCTCTCTTGCATCAGTTATACTATCAACTCTCGCTGTTTTTGTCACCCGAGCTGATAAACATGGAGTTCAAATTGTGAAACACGTCAAAGCAGGGCTGAATCCAAGCTCTGTCCATCAATTGCAGCTGAACAGCCCTTATATTGCTGAAGTCGCCAAAATCGGACTGGTTGCTGCTGTTATTTCACTCACTGAATCGGTTTCAGTTGGCCGATCTTTTGCTTCCCTCAGAGGATACCACCTTGATGGAAACAAAGAAATGGTGTCCATCGGATTCATGAACATTATAGGATCTTTCACATCAAGCTATGTCGCAACTGGGTCGTTTTCGCGTACGGCGGTGAATGTGGCGGCGGGATGTGAAACTGCAGGGTCAAATATTGTGATGGCTATTACGGTGGTCATATCGTTGCTATGCTTCACGAAGCTCTTATATTTCACTCCGATGGCGATTCTGGCCTCAATCATCCTTTCTGCTCTCCCAGGACTCATAGACTTCAACGAGGCTTACAGAATTTGGAAGCTTGATAAGCTCGACTTTCTTGCTTGTGCTGGAGCCTTCTTTGGGGCCCTCTTCTCTTCCGTCGAGACTGGCTTGCTTGTGGCCGTGGCGATATCCTTTACAAATATAATAATGATGTCAATTCGACCGGGCACAGAAGCTCTGGGAAGACTCCCTGAAACTGACTTGTTCTGCGATGCACATCAGTATCCTATGGCTGTTAAGACTGCTGGAGTTTTAATAATACGTATCAAGTCTGCCTTGCTTTGCTTTGCCAATGCCAACTTCGTCAGACAAAGGATCATGAAATGGATCGCCCACGAAGAAGAAGAAGCCAATGAGAACGAGGGAGTCATCACCAAAAGGATAATTCAGCTCGTAATCATCGATGCCTCCAATTTAATGAACATCGACACGTCAGGAATTTCTTCTCTAGAGGAACTACATAAGAGTTTGGTTTCACATGGGAAGCAGTTAGCAATTGCGAACCCAAGGTGGGAAGTGATTCACAAGCTGAAGTCTGCTAACTTCGTCAAAACAATTGGTGGAAGGGTCTTCTTGACTGTTGCCGAAGCTGTTGGGTGTAAGCAGGATCGAGTCTAA 1953 0.4639 MEDVEVVVDDIEKKGEEPNERSEWVLNAPEPPSPWHVFVGSVSNTISQYQEKAYGLRSQSGPKLVLSFLQAIFPVLDWGRNYTAISFRNDLLAGLTVASLCIPQGIGYATLARLDPEYGLYTSALPPLIYAMMGSSREVAIGPVAVVSLLLSSMVQKLTDPSTDPLGYTKLVLTATLFAGIFQAAFGLLRLGFLLEFLSHAAIVGFTAGAAIVIGLQQLKGLFGFQRFTNETDVVSVTISVRQSLDHPWNYSNLVLGCSFLIFMLACRFLSKRNRKLFWLPAISSLASVILSTLAVFVTRADKHGVQIVKHVKAGLNPSSVHQLQLNSPYIAEVAKIGLVAAVISLTESVSVGRSFASLRGYHLDGNKEMVSIGFMNIIGSFTSSYVATGSFSRTAVNVAAGCETAGSNIVMAITVVISLLCFTKLLYFTPMAILASIILSALPGLIDFNEAYRIWKLDKLDFLACAGAFFGALFSSVETGLLVAVAISFTNIIMMSIRPGTEALGRLPETDLFCDAHQYPMAVKTAGVLIIRIKSALLCFANANFVRQRIMKWIAHEEEEANENEGVITKRIIQLVIIDASNLMNIDTSGISSLEELHKSLVSHGKQLAIANPRWEVIHKLKSANFVKTIGGRVFLTVAEAVGCKQDRV 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00184 650 CDD STAS_SulP_like_sulfate_transporter 520 637 - -
Accr12g00184 650 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Accr12g00184 650 ProSiteProfiles STAS domain profile. 539 646 IPR002645 -
Accr12g00184 650 NCBIfam sulfate permease 74 639 IPR001902 GO:0016020|GO:0055085
Accr12g00184 650 FunFam Sulfate transporter 31 499 648 - -
Accr12g00184 650 Pfam Sulfate permease family 87 467 IPR011547 GO:0016020
Accr12g00184 650 SUPERFAMILY SpoIIaa-like 525 643 IPR036513 -
Accr12g00184 650 Coils Coil 650 650 - -
Accr12g00184 650 PANTHER SULFATE TRANSPORTER 63 645 IPR001902 GO:0016020|GO:0055085
Accr12g00184 650 Gene3D STAS domain 499 649 IPR036513 -
Accr12g00184 650 Pfam STAS domain 520 642 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00184 Accr-Chr12 1763328 1766994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00184 13 643 Inorganic Solute Cotransporters AT5G10180 63.391 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00184 K17469 - gmx:100775538 898.656