Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00183 ATGGATTCTTCGGCCCAAATGGAAGACGTGGAGGTGGTGGTGGATGATATTGAGAAGAAGGGTGAAGAACCTAATGAAAGGTCTGAGTGGGTGCTGAATGCTCCTGAGCCTCCAAGTCCGTGGCATGTATTTGTGGGGTCAGTGAGCAACACCATTTCACAGTATCAAGAAAAGGCGTATGGTCTCAGAAGCCAATCCGGACCTAAACTTGTGCTTTCATTCCTTCAGGCCATTTTTCCTGTTCTTGACTGGGGTCGAAACTATACAGCCATAAGTTTCAGGAACGACTTACTTGCAGGTCTCACTGTTGCAAGTCTCTGTATTCCTCAGGGCATTGGGTATGCAACTTTAGCAAGGCTGGATCCTGAATATGGCCTCTATACAAGTGCGTTGCCGCCTCTTATCTATGCAATGATGGGAAGTTCAAGAGAGGTAGCAATTGGACCTGTGGCCGTGGTTTCATTGCTGTTGTCGTCAATGGTTCAGAAACTAACAGACCCTTCCACTGATCCATTGGGTTACACTAAGCTAGTTCTTACTGCCACTCTATTTGCCGGCATATTCCAGGCGGCCTTTGGACTCTTGAGGTTGGGGTTCTTGCTGGAATTTCTGTCGCATGCTGCTATTGTAGGATTCACGGCGGGAGCGGCCATTGTTATTGGACTTCAACAGCTGAAGGGCCTTTTTGGCTTCCAACGTTTTACCAACGAAACCGACGTCGTCTCTGTCACCATCTCCGTTCGCCAATCTCTTGATCATCCTTGGAATTACAGCAATTTAGTGCTGGGATGCTCGTTCCTCATTTTCATGCTTGCATGCAGATTTCTGAGTAAAAGGAACAGAAAACTGTTTTGGCTGCCAGCAATCTCCTCTCTTGCATCAGTTATACTATCAACTCTCGCTGTTTTTGTCACCCGAGCTGATAAACATGGAGTTCAAATTGTGAAACACGTCAAAGCAGGGCTGAATCCAAGCTCTGTCCATCAATTGCAGCTGAACAGCCCTTATATTGCTGAAGTCGCCAAAATCGGACTGGTTGCTGCTGTTATTTCACTCACTGAATCGGTTTCAGTTGGCCGATCTTTTGCTTCCCTCAGAGGATACCACCTTGATGGAAACAAAGAAATGGTGTCCATCGGATTCATGAACATTATAGGATCTTTCACATCAAGCTATGTCGCAACTGGGTCGTTTTCGCGTACGGCGGTGAATGTGGCGGCGGGATGTGAAACTGCAGGGTCAAATATTGTGATGGCTATTACGGTGGTCATATCGTTGCTATGCTTCACGAAGCTCTTATATTTCACTCCGATGGCGATTCTGGCCTCAATCATCCTTTCTGCTCTCCCAGGACTCATAGACTTCAACGAGGCTTACAGAATTTGGAAGCTTGATAAGCTCGACTTTCTTGCTTGTGCTGGAGCCTTCTTTGGGGCCCTCTTCTCTTCCGTCGAGACTGGCTTGCTTGTGGCCGTGGCGATATCCTTTACAAATATAATAATGATGTCAATTCGACCGGGCACAGAAGCTCTGGGAAGACTCCCTGAAACTGACTTGTTCTGCGATGCACATCAGTATCCTATGGCTGTTAAGACTGCTGGAGTTTTAATAATACGTATCAAGTCTGCCTTGCTTTGCTTTGCCAATGCCAACTTCGTCAGACAAAGGATCATGAAATGGATCGCCCACGAAGAAGAAGAAGCCAATGAGAACGAGGGAGTCATCACCAAAAGGATAATTCAGCTCGTAATCATCGATGCCTCCAATTTAATGAACATCGACACGTCAGGAATTTCTTCTCTAGAGGAACTACATAAGAGTTTGGTTTCACATGGGAAGCAGTTAGCAATTGCGAACCCAAGGTGGGAAGTGATTCACAAGCTGAAGTCTGCTAACTTCGTCAAAACAATTGGTGGAAGGGTCTTCTTGACTGTTGCCGAAGCTGTTGGGTGTAAGCAGGATCGAGTCTAA 1971 0.4642 MDSSAQMEDVEVVVDDIEKKGEEPNERSEWVLNAPEPPSPWHVFVGSVSNTISQYQEKAYGLRSQSGPKLVLSFLQAIFPVLDWGRNYTAISFRNDLLAGLTVASLCIPQGIGYATLARLDPEYGLYTSALPPLIYAMMGSSREVAIGPVAVVSLLLSSMVQKLTDPSTDPLGYTKLVLTATLFAGIFQAAFGLLRLGFLLEFLSHAAIVGFTAGAAIVIGLQQLKGLFGFQRFTNETDVVSVTISVRQSLDHPWNYSNLVLGCSFLIFMLACRFLSKRNRKLFWLPAISSLASVILSTLAVFVTRADKHGVQIVKHVKAGLNPSSVHQLQLNSPYIAEVAKIGLVAAVISLTESVSVGRSFASLRGYHLDGNKEMVSIGFMNIIGSFTSSYVATGSFSRTAVNVAAGCETAGSNIVMAITVVISLLCFTKLLYFTPMAILASIILSALPGLIDFNEAYRIWKLDKLDFLACAGAFFGALFSSVETGLLVAVAISFTNIIMMSIRPGTEALGRLPETDLFCDAHQYPMAVKTAGVLIIRIKSALLCFANANFVRQRIMKWIAHEEEEANENEGVITKRIIQLVIIDASNLMNIDTSGISSLEELHKSLVSHGKQLAIANPRWEVIHKLKSANFVKTIGGRVFLTVAEAVGCKQDRV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00183 656 NCBIfam sulfate permease 80 645 IPR001902 GO:0016020|GO:0055085
Accr12g00183 656 CDD STAS_SulP_like_sulfate_transporter 526 643 - -
Accr12g00183 656 Pfam STAS domain 526 648 IPR002645 -
Accr12g00183 656 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Accr12g00183 656 SUPERFAMILY SpoIIaa-like 531 649 IPR036513 -
Accr12g00183 656 Gene3D STAS domain 505 655 IPR036513 -
Accr12g00183 656 Pfam Sulfate permease family 93 473 IPR011547 GO:0016020
Accr12g00183 656 FunFam Sulfate transporter 31 505 654 - -
Accr12g00183 656 PANTHER SULFATE TRANSPORTER 69 651 IPR001902 GO:0016020|GO:0055085
Accr12g00183 656 ProSiteProfiles STAS domain profile. 545 652 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00183 Accr-Chr12 1763310 1766994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00183 19 649 Inorganic Solute Cotransporters AT5G10180 63.391 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00183 K17469 - gmx:100775538 898.656