Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00159 ATGGCCATTTCACCTTTTGGAAACACATCTGTTGCACAATGGGGAATCCGTCCTCAGTTATTTATGAGATCCTGTATGACAGGAAGGATTACATCATCTGGCCTCGGTGTTACAAGTAGGGTAAGCTTTATCGCTGCCCCAAGTTCAAGCTTTTTTGGTTGTGATTCATTGCATATGCTATATGGCCTGGGTTCTTCTCAAACTGTTAATCATCGCAAGGGATCAAGGTTTATAGTTAGAGCGGATGCAGATTACTATTCTGTCCTTGGGGTGTCAAGAAATGCTAGTAAATCTGAAATCAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCACCCAGATGTGAACAAAGAACCTGGCGCAGAACAGAAGTTTAAGGAAATTAGCAATGCATATGAGGTCTTGTCAGATGATGAGAAACGATCCATATATGACAGATATGGAGAGGCAGGGCTTAAAGGTTCTGGAATAGGCATGGGGGATTTCAGTAATCCTTTTGATCTGTTTGAGACTCTGTTTGAGGGTATGAATCAGGGGAGAGGTTCCTGGAATGGAGCTATTGATGGTGAAGATGAGTATTATAGTCTTGTGTTGAACTTTAAGGAAGCAGTTTTTGGAGTAGAAAAAGAGATAGAGATCAGCCGGCTAGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCGGGAACCAAGCCGACCAGATGTAGCACTTGTGGGGGTCAAGGTAGGGTTGTGTCATCAACAAGGACGCCATTAGGTATTTTCCAGCAGTCCATGACATGCTCTTCATGCAATGGGACTGGAGAAATTTCAACACCGTGCAATACATGTTCCGGGGATGGTCGGGTACGAAGGACAAAACGGATAAGTCTGAAAGTCCCAGCTGGTGTAGACTCTGCTAGCCGTTTAAGGGTCCGAAATGAAGGAAATGCTGGAAGGCGAGGTGGTTCTCCCGGTGACCTCTTTGTTGTTATCGAAGTTGTCCCCGATCCAGTCCTTAAACGTGATGACACCAACATTTTATACACTTGCAAGGTGTCATACTTAGATGCAATCCTCGGAACTACAATCAAGGTTCCTACTGTGGATGGCATGGTGGATTTAAAAATCCCTGCTGGGACCCAACCGAACACAACACTTGTTATGGCTAGAAAAGGTGTTCCTCTGCTGAACAAGAGCAGTATGAGGGGTGATCAGTTGGTTCGAGTGCAAGTTGAAATCCCCAAAAAGTTAAGCAGCGAAGAGAGGAAGCTTATTGAGGAACTTGCTGATTTAAGCAAAGGCAAGACTGCGACTGGTAAGAGATAA 1311 0.4485 MAISPFGNTSVAQWGIRPQLFMRSCMTGRITSSGLGVTSRVSFIAAPSSSFFGCDSLHMLYGLGSSQTVNHRKGSRFIVRADADYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGIGMGDFSNPFDLFETLFEGMNQGRGSWNGAIDGEDEYYSLVLNFKEAVFGVEKEIEISRLESCGTCNGSGAKPGTKPTRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGEISTPCNTCSGDGRVRRTKRISLKVPAGVDSASRLRVRNEGNAGRRGGSPGDLFVVIEVVPDPVLKRDDTNILYTCKVSYLDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMARKGVPLLNKSSMRGDQLVRVQVEIPKKLSSEERKLIEELADLSKGKTATGKR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00159 436 Pfam DnaJ domain 84 145 IPR001623 -
Accr12g00159 436 CDD DnaJ 84 137 IPR001623 -
Accr12g00159 436 PRINTS DnaJ domain signature 104 119 IPR001623 -
Accr12g00159 436 PRINTS DnaJ domain signature 120 140 IPR001623 -
Accr12g00159 436 PRINTS DnaJ domain signature 140 159 IPR001623 -
Accr12g00159 436 PRINTS DnaJ domain signature 86 104 IPR001623 -
Accr12g00159 436 ProSiteProfiles Zinc finger CR-type profile. 206 287 IPR001305 GO:0031072|GO:0051082
Accr12g00159 436 FunFam Chaperone protein dnaJ A6 chloroplastic 81 184 - -
Accr12g00159 436 Pfam DnaJ central domain 219 282 IPR001305 GO:0031072|GO:0051082
Accr12g00159 436 Gene3D - 189 324 - -
Accr12g00159 436 CDD DnaJ_zf 219 282 IPR001305 GO:0031072|GO:0051082
Accr12g00159 436 SMART dnaj_3 83 140 IPR001623 -
Accr12g00159 436 Gene3D DnaJ domain 81 184 IPR036869 -
Accr12g00159 436 Pfam DnaJ C terminal domain 194 409 IPR002939 -
Accr12g00159 436 NCBIfam molecular chaperone DnaJ 84 425 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Accr12g00159 436 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Accr12g00159 436 Hamap Chaperone protein DnaJ [dnaJ]. 81 432 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Accr12g00159 436 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Accr12g00159 436 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 206 285 IPR036410 -
Accr12g00159 436 CDD DnaJ_C 190 412 - -
Accr12g00159 436 FunFam Molecular chaperone DnaJ 211 287 - -
Accr12g00159 436 FunFam Putative Mitochondrial DnaJ chaperone 274 324 - -
Accr12g00159 436 Gene3D - 219 282 - -
Accr12g00159 436 SUPERFAMILY HSP40/DnaJ peptide-binding domain 334 420 IPR008971 GO:0006457|GO:0051082
Accr12g00159 436 Gene3D - 329 435 - -
Accr12g00159 436 FunFam Chaperone protein dnaJ 1, mitochondrial 329 436 - -
Accr12g00159 436 SUPERFAMILY Chaperone J-domain 81 179 IPR036869 -
Accr12g00159 436 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 49 433 - -
Accr12g00159 436 SUPERFAMILY HSP40/DnaJ peptide-binding domain 187 342 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00159 Accr-Chr12 1451725 1454712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00159 85 147 C2H2 Transcription Factor Family AT1G74250 43.478 2.62e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00159 K03686 - gmx:100811006 764.992