Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00152 ATGGAACGGTATGATATAATCAGAGATATTGGGTCAGGCAACTTTGGGGTGGCGAAGCTGGTGAGGGATAAACGGAGTGGTGACTTATACGCTATCAAGTTTATTGAGAGAGGCATAAAGATTGATGAGCATGTGCAAAGGGAGATCATAAACCATAGATCCTTGAAGCATCCCAACATCATTCGATTCAAAGAGGTGTTGCTCACTCCAACCCATCTTGCCATAGTGATGGAATATGCCTCTGGAGGAGAACTCTTTGAAAGAATTTGTAATGCGGGTAGATTCAGTGAAGATGAGGCAAGGTATTTCTTTCAGCAGTTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCACAGAGATCTTAAACTAGAAAACACACTCTTAGATGGAAGCGCAGCTCCGCGACTCAAAGTTTGCGACTTTGGCTACTCAAAGTCATCAGTTCTGCACTCTCAGCCCAAATCTACCGTAGGAACCCCTGCTTACATTGCCCCAGAGGTTTTGTCACGAAGGGAATATGATGGAAAGGTTGCAGATGTTTGGTCTTGTGGTGTGACCTTATATGTCATGCTGGTTGGTGCCTATCCTTTCGAAGATCATGAAGATCCTAAAAACTTCAGAAAAACACTTCAGCCGTGGTTCCTGAAGAACTTGCCACTGGAATTTATGGAACAAGGGAGGCAAAGTGGGATACAAGAAGATTTATATGTGAACGATTTGTGCGGGAGGCAGAGCATCGAAGAGATATCGAGTATAATACAAGAAGCAAGAAAAGCAGGGGATCAAGGCCAAAAAGTTGGCGGGCATTTCGTTGGAATTGGAAGTATGGATCTTTATGAGATGGATGCTGATGCTGACATTGATGATTTCGAGACAAGTGGTGATTTTGTCTGTGCTATGTGA 912 0.4342 MERYDIIRDIGSGNFGVAKLVRDKRSGDLYAIKFIERGIKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYASGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSAAPRLKVCDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDHEDPKNFRKTLQPWFLKNLPLEFMEQGRQSGIQEDLYVNDLCGRQSIEEISSIIQEARKAGDQGQKVGGHFVGIGSMDLYEMDADADIDDFETSGDFVCAM 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00152 303 ProSiteProfiles Protein kinase domain profile. 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00152 303 PANTHER SERINE/THREONINE KINASE 2 252 - -
Accr12g00152 303 SUPERFAMILY Protein kinase-like (PK-like) 1 218 IPR011009 -
Accr12g00152 303 Gene3D Transferase(Phosphotransferase) domain 1 80 255 - -
Accr12g00152 303 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Accr12g00152 303 SMART serkin_6 4 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00152 303 Pfam Protein kinase domain 4 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00152 303 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Accr12g00152 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Accr12g00152 303 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Accr12g00152 303 FunFam Serine/threonine-protein kinase SRK2A 80 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00152 Accr-Chr12 1398279 1400910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00152 3 217 CBL-interacting serine-threonine protein kinases AT2G26980 43.103 3.64e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Accr12g00152 Pkinase 2.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00152 K14498 - gmx:100807981 491.5