Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00151 ATGGAACGGTATGATATAATCAGAGATATTGGGTCAGGCAACTTTGGGGTGGCGAAGCTGGTGAGGGATAAACGGAGTGGTGACTTATACGCTATCAAGTTTATTGAGAGAGGCATAAAGATTGATGAGCATGTGCAAAGGGAGATCATAAACCATAGATCCTTGAAGCATCCCAACATCATTCGATTCAAAGAGGTGTTGCTCACTCCAACCCATCTTGCCATAGTGATGGAATATGCCTCTGGAGGAGAACTCTTTGAAAGAATTTGTAATGCGGGTAGATTCAGTGAAGATGAGGCAAGGTATTTCTTTCAGCAGTTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCACAGAGATCTTAAACTAGAAAACACACTCTTAGATGGAAGCGCAGCTCCGCGACTCAAAGTTTGCGACTTTGGCTACTCAAAGTCATCAGTTCTGCACTCTCAGCCCAAATCTACCGTAGGAACCCCTGCTTACATTGCCCCAGAGGTTTTGTCACGAAGGGAATATGATGGAAAGGTTGCAGATGTTTGGTCTTGTGGTGTGACCTTATATGTCATGCTGGTTGGTGCCTATCCTTTCGAAGATCATGAAGATCCTAAAAACTTCAGAAAAACACTTCAGCGAATTCTCAGCGTCCACTATTCTATACCAGACTATGTTCGCATCTCAAAAGAGTGTAAACACCTTCTATCTAGAATATTCGTGGCCGATCCAGAGAAACCGTGGTTCCTGAAGAACTTGCCACTGGAATTTATGGAACAAGGGAGGCAAAGTGGGATACAAGAAGATTTATATGTGAACGATTTGTGCGGGAGGCAGAGCATCGAAGAGATATCGAGTATAATACAAGAAGCAAGAAAAGCAGGGGATCAAGGCCAAAAAGTTGGCGGGCATTTCGTTGGAATTGGAAGTATGGATCTTTATGAGATGGATGCTGATGCTGACATTGATGATTTCGAGACAAGTGGTGATTTTGTCTGTGCTATGTGA 1011 0.4322 MERYDIIRDIGSGNFGVAKLVRDKRSGDLYAIKFIERGIKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYASGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSAAPRLKVCDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDHEDPKNFRKTLQRILSVHYSIPDYVRISKECKHLLSRIFVADPEKPWFLKNLPLEFMEQGRQSGIQEDLYVNDLCGRQSIEEISSIIQEARKAGDQGQKVGGHFVGIGSMDLYEMDADADIDDFETSGDFVCAM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00151 336 SUPERFAMILY Protein kinase-like (PK-like) 1 247 IPR011009 -
Accr12g00151 336 PANTHER SERINE/THREONINE KINASE 2 254 - -
Accr12g00151 336 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Accr12g00151 336 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Accr12g00151 336 Pfam Protein kinase domain 4 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00151 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Accr12g00151 336 Gene3D Transferase(Phosphotransferase) domain 1 80 258 - -
Accr12g00151 336 SMART serkin_6 4 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00151 336 FunFam Serine/threonine-protein kinase SRK2E 80 258 - -
Accr12g00151 336 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Accr12g00151 336 ProSiteProfiles Protein kinase domain profile. 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00151 Accr-Chr12 1398279 1400910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00151 3 258 CBL-interacting serine-threonine protein kinases AT5G25110 41.577 3.31e-62 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Accr12g00151 Pkinase 1.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00151 K14498 - gmx:100807981 567