Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00132 ATGCCTACCCGTTCTTCACTTTCACCTGATACCCACGATTCTTCCACTTTGAAGCGGAAGAGGCCTCTCAATATTCAGATACCAGACGTCTTGCAAGAAATCCAGACACCCAAGCTTAATGATTCCAAGGCATTGAAGGACAACATTTCTCTTAGCGGGATTGGTTTTGGGGTTTTTTCTGTAAAAGGAAAGAAACTGTGCATGGAAGATGCTCACAAGATTGTTTCTTCTTTAGAGGGCGACCCAAAAAAAGGCTTCTTTGGCGTCTACGATGGGCATGGCGGCCGGAAGGCTGCAGAGTTTGTCGTTGAGAACTTGCACGCCAATATTCTCGAAATGGTGGACAATCGTGAAGAATCAAGGACCAAGGAGGAAGCAGTTAAAGCTGGGTATCTAAAGACCGACGAAGAATTCTTGAAAAAGGGTGTAGGAAGCGGTGCCTGTTGTGTGACAGCCCTGATTCAAGGGGAAGAGATTGTTGTTTCAAACGTGGGAGATTGCAGGGCTGTTCTTTGCAGAGGTGGAGTGGCTGAAGCTCTCACTAGAGATCACAGAGCTGAACTAGAGGATGAACGGAAAAGAATTGAGCAAAAGGGAGGATATGTGGAGATACATCGAGGAGCTTGGAGAATTCATGGGGTGCTCTCTGTTTCTAGAAGCATTGGGGATGCTCATCTGAAGGAATGGGTGGTGGCTGAACCTGATACCAAGATCTTACAATTAACTGCAGACATGGAGTTTCTTGTGTTGGGGTCTGATGGACTGTGGGATAAGGTCGGTAACCAAGAAGCTGTTGACACTTTGACCCGTGTTTGTCGAAATGAGGAAAAGCTAGGCTTCGATGTACAGAATGACACTGATGTTGATGATTATGTTCAAGTTAATGTAAGTCCGTCATCGAAGCTACGAAGAGTTTCGCTTGTGAAGCACCCTAGGGGCCATAGAAAGGCACAGAATGGCTGGAATGAAGTTGGTGAAGATGAATTTGGTTGTGAAAATGAAAGCCCTCCATCGAAGTCAAGAAGAATTTCATGGATGAAGCGAGTGAGCATGAAGAAAGAGATGCCAGTAAAAGAAAGCAACATGTGCAAGAAAGGTGAAGGCTCTGGACTTCTGGCGGCTTGCAAGGAGCTTGTAAACCTTGCTGTGAAAAGGGGGACTTTGGATGATGTCACTGTAATGATAATCGATTTAAAACACTACAAATGCAACATCTGA 1218 0.4524 MPTRSSLSPDTHDSSTLKRKRPLNIQIPDVLQEIQTPKLNDSKALKDNISLSGIGFGVFSVKGKKLCMEDAHKIVSSLEGDPKKGFFGVYDGHGGRKAAEFVVENLHANILEMVDNREESRTKEEAVKAGYLKTDEEFLKKGVGSGACCVTALIQGEEIVVSNVGDCRAVLCRGGVAEALTRDHRAELEDERKRIEQKGGYVEIHRGAWRIHGVLSVSRSIGDAHLKEWVVAEPDTKILQLTADMEFLVLGSDGLWDKVGNQEAVDTLTRVCRNEEKLGFDVQNDTDVDDYVQVNVSPSSKLRRVSLVKHPRGHRKAQNGWNEVGEDEFGCENESPPSKSRRISWMKRVSMKKEMPVKESNMCKKGEGSGLLAACKELVNLAVKRGTLDDVTVMIIDLKHYKCNI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00132 405 ProSiteProfiles PPM-type phosphatase domain profile. 55 398 IPR001932 -
Accr12g00132 405 Coils Coil 178 198 - -
Accr12g00132 405 SMART PP2C_4 41 396 IPR001932 -
Accr12g00132 405 MobiDBLite consensus disorder prediction 1 22 - -
Accr12g00132 405 Gene3D - 49 403 IPR036457 -
Accr12g00132 405 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Accr12g00132 405 Pfam Protein phosphatase 2C 55 271 IPR001932 -
Accr12g00132 405 SUPERFAMILY PP2C-like 48 400 IPR036457 -
Accr12g00132 405 CDD PP2Cc 54 284 IPR001932 -
Accr12g00132 405 PANTHER PROTEIN PHOSPHATASE 2C 43 397 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00132 Accr-Chr12 1274723 1276946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00132 2 402 PP2C-type Phosphatase Gene Family AT1G67820 51.683 1.64e-134 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00132 - - pcin:129320141 670.233