Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00126 ATGTTGGGCGAAGAGGGTAAGGAGTGTTCCGGCGATGGCGACGACCGTCGGAGAACATATTCACGTTCTGTTTCGTGGACTGATCGGTCTCCGACCAACATTAGCCAAAACCGCCGGCCGCCGACAAATAGTAAGCCCCGGCCATTGTTGCCTCCTCTCCAGCCTCTCTCCATCATGAAACGGACGGCTGAGGAGTGGCCAAGCGCGGGATCTGACGATCTTGGAATTTGGCCTCTTCCACAAACCCCAAGAGGGTCCGTCAAAGCCCTGGAGAGTTCTGATTCGGGTCAACCCGCAAAAGAATTTCAGTTCAAGAGGGACAAGTTAGCGTTTTTTGACAAAGAGTGTTCCAGAATCGCGGAGCATATATATCTAGGGAGTGATACAGTGGCGAAAAATCACGAGCTTTTGAGGCAAAACGGGATTACCCATGTGCTCAACTGTGTAGGGTTTGTTTGTCCTGAGTATTTCAAAAGCGATTTTGTGTATAAGACACTCTGGTTGCAAGATAGCCCCACCGAGGACATCACCAGTATCCTCTACGATGTTTTTGATTACTTTGAGGATGTCCGAGAGCAAGGCGGGCGTGTTCTTGTGCATTGTTGCCAGGGAGTTTCTCGATCAAGCTCGCTGGTAATTGCATATCTCATGTGGAGAGAAGGTCAGAGCTTTGAAGATGCGTTTCAGTATGTGAAGACTGCACGAGGAGTGACCAATCCAAATATGGGTTTTGCCTGTCAACTTCTTCAGTGTCAGAAACGTGTACTTGCCATGCCCGCAAGTCCAAATTCCATTCGTAGGATGTATCGAATGGCCCCTCACTCACCTTACGACCCTCTTCATTTAGTCCCCAAAATGGTAAACCATCCAGGTGCTCGAGCTCTTGATTCTCGTGGAGCGTTCATTATTCATGTTCCTTCTGCTATATATGTTTGGAGTGGAAAAAGCTGCAGTCCCATGATGTCATGTAATGCAAGAGCTGCAGCATGTCAGGTCATACGTTATGAGAAGGCAAAGGGTCTAATTCAGGGTATCAAAGAAGGTGAAGAACCTCTGGAGTTTTGGATTGCTCTTGCTAATGAGCAAATCTTATCAGGCCATGAAAGCGTGGAGGTTCGTGAAGCTGGTGATAGTATGGAGATTGGTGAGAGAAAGGTTAATGAGTATGATTTGGATTTTGAAATTTTCCACAAGGCACTTGCTGGTGGGGTAGTTCCACCTTTCTCTGTTTCTAGGGCTGGATCAGAAACTTGCTTACCTGCTAGAGAAAACGGTTGGGGTAGACTGAGGAGGAATTTTGCTCGTGGTATGATGAAAGAATGGCTCGCATCATCCTGTAAATGGAACTGTGAAGTTATTACTACCAAATCCGAAGAGGAGTGCTGTGTGATTATGCAAGAAGAACAATATTCTGTAGTTGATCCTATTTTATCACCAGCTTCACCAACCTATCCCTGTGGTTCCCCTGATTCTTTTGAATGTTTTCCAGATAACCGATCAGATATGGCAAAGGATAGCTCTATTGAAGTCATGGAGGATTTCTCTGCTCCTCCCACTTCAGATTCTTTTTCTTGTTTTCTACGCAACAGCCCAAAGTTCAATTCCAAGTCCCCAACACTCTCACCCTCCAGTTCTGATTATGCCAGTTCTTTTACATTTTCACCTTCATCTACACAATGGTCTGACTTGTCGCATGTGTCTTCTAGGCAGCCATCACCATCTAGCATCGAACCAACTGATCTTTTTTATGCCAAAGATCTTTCTTTCTCAGAGAACTCATTACTTCTCAAAGCTGTTTCGTCACCTAAAGAGGAGCCATTTTGTGCTAACCACACAATGGGAGGGGTAAACAACTATTTGCAGAGTGAAGGATCTTCCCCTTCCCTTGCAGAGCGCAGAGGGAGTAATCCACCGCCTCGTATGTTCCTTCCCTCTATCAACGAATCATCTCACAGCCACACCAAACTGGTAAGATCACAGTCATTCTCTATGCCTGACTTAGACGGTAATGTAATGGAGGATGTTAGTTTGAAGCAATCTGATCAACAAAACAATGGAAAAGAGCAAGAGCCAATAGAACATGCTGATATTAGTTCAGGTGGTGAATCGCAGAGTGAAAATAATGACACTGATCATAATATGCGACTATGTTATGTGATATAG 2163 0.4531 MLGEEGKECSGDGDDRRRTYSRSVSWTDRSPTNISQNRRPPTNSKPRPLLPPLQPLSIMKRTAEEWPSAGSDDLGIWPLPQTPRGSVKALESSDSGQPAKEFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRQNGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSSSLVIAYLMWREGQSFEDAFQYVKTARGVTNPNMGFACQLLQCQKRVLAMPASPNSIRRMYRMAPHSPYDPLHLVPKMVNHPGARALDSRGAFIIHVPSAIYVWSGKSCSPMMSCNARAAACQVIRYEKAKGLIQGIKEGEEPLEFWIALANEQILSGHESVEVREAGDSMEIGERKVNEYDLDFEIFHKALAGGVVPPFSVSRAGSETCLPARENGWGRLRRNFARGMMKEWLASSCKWNCEVITTKSEEECCVIMQEEQYSVVDPILSPASPTYPCGSPDSFECFPDNRSDMAKDSSIEVMEDFSAPPTSDSFSCFLRNSPKFNSKSPTLSPSSSDYASSFTFSPSSTQWSDLSHVSSRQPSPSSIEPTDLFYAKDLSFSENSLLLKAVSSPKEEPFCANHTMGGVNNYLQSEGSSPSLAERRGSNPPPRMFLPSINESSHSHTKLVRSQSFSMPDLDGNVMEDVSLKQSDQQNNGKEQEPIEHADISSGGESQSENNDTDHNMRLCYVI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00126 720 MobiDBLite consensus disorder prediction 618 714 - -
Accr12g00126 720 ProSiteProfiles Dual specificity protein phosphatase domain profile. 115 257 IPR020422 GO:0006470|GO:0008138
Accr12g00126 720 Gene3D Severin 268 364 IPR029006 -
Accr12g00126 720 PANTHER MKPA PROTEIN 14 655 - -
Accr12g00126 720 MobiDBLite consensus disorder prediction 698 712 - -
Accr12g00126 720 MobiDBLite consensus disorder prediction 557 577 - -
Accr12g00126 720 SUPERFAMILY Actin depolymerizing proteins 261 360 - -
Accr12g00126 720 CDD DSP 116 250 - -
Accr12g00126 720 Gene3D Protein tyrosine phosphatase superfamily 89 256 IPR029021 -
Accr12g00126 720 ProSitePatterns Tyrosine specific protein phosphatases active site. 199 209 IPR016130 GO:0016311|GO:0016791
Accr12g00126 720 MobiDBLite consensus disorder prediction 1 58 - -
Accr12g00126 720 SMART dsp_5 115 254 IPR020422 GO:0006470|GO:0008138
Accr12g00126 720 Pfam Dual specificity phosphatase, catalytic domain 123 253 IPR000340 GO:0008138|GO:0016311
Accr12g00126 720 MobiDBLite consensus disorder prediction 618 632 - -
Accr12g00126 720 MobiDBLite consensus disorder prediction 642 666 - -
Accr12g00126 720 MobiDBLite consensus disorder prediction 1 23 - -
Accr12g00126 720 MobiDBLite consensus disorder prediction 24 43 - -
Accr12g00126 720 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 107 257 IPR029021 -
Accr12g00126 720 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 174 235 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00126 Accr-Chr12 1246916 1249078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00126 39 151 Protein tyrosine phosphatase (PTP) family AT3G55270 52.500 6.32e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00126 - - qsa:O6P43_023149 886.33