Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00106 ATGCTTAGTCCTGAAGGAGAACTTAAAATTAGTTTTGGCTATCAATGCAATAGCCAAAGAAGTATACCTTGTGAGGCTGCGAAAGGCTATAACATTCTACCCGAAGTTCACAGAACAAGCAGTTTCTCCTGCTTGTCTGGTGCAGCCTTGAGTGCAAATGCTACGTTAGCCAACACAAACATCTGCAATGGTCTGCTAGGAGAAGAAATACTTCCAACTTGGGACTCACCCAATTCATTCCGTAAGGTACCCTCTTCTCCAAATCTTTCAAGGTTGGATATATTATCATCTTCTCTCCAGAGTAATTTCTCAAACTTAAGTTGCAGTCCACCAACTCCAAGCGATTTGCTTGATTATGACTCTTGTACATTAAAATGCATGAGTGCTCCTTCCAAGAGTGAAGGTTTTTTTAATGCCATGGAAGTCCAAGCTGCAGGGGGAGCTGCTGGCGAAGATAGAGTTCAAGCTGTTTGTTCTGAAGAAAACGGTTGGCTCTTTTGTGCAGTTTATGACGGCTTTAATGGAAGAGATGCTGCCGACTTTCTGGCCGGTACTGTGTATGACACAATTATATCTAACTTTAATGCATTGTATTGGGGATTTGAGCCAGATTCCAATCAAGCTTCTAATGATGTGGGTTTGGGTGGATCCTATAAGTTGGATGATACTCTCATGGTTCATCAGGAGCAATCTCTGTCAAAACTTGAGGGAAACAACAATTCTTATCTTGGCTGTTTGGCAAAGAGTGACCTATCTGCTAAGGAAATGGAGGAACGGCCTGATTTAGTTTCTGTTGGATCTTGTGTTTTGCTTGTGCTTCTTCATGGGAATGACTTGTACACACTTAATTTAGGTGACAGCAAAACTGTATTAGCAACATGTAACACAAGAGGCAAACTTCAAGCTATCCAGCTTACAGAAAGCCATACCGTTGACAATGATGTTGAAAGAGCTCGACTCCTGGCTGATCACCCAGATGATCCTAAAGCCATTATAGGAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCGTTAGGAGTAGGTTACTTGAAAAAGAAATGTCTGAATGATGCGCTGATGGGAATCCTTCGAGTTCGAGATCTTATAAGCCCTCCATATGTTTCCTCTCAACCATCACTGAATGTGCATAAGATCTCAAACTCTGATCAATTTGTGATTGTAGGAAGTGATGGCTTATTTGACTTCTTCAGTAATGATGAGGCTGTGGAGCTTGTTGAGTCTTATATCTTAAGCAATCCATTTGGTGATCCAGCTAAGTTTCTTATCGAGCAGCTTGTAGCAAGAGCAGCCATTTCCGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCCGCCGGGAGGAGGAGGAGGTATCATGATGACGTGACCGTGATTGTGATAATTCTTGGGACGAGTCATCGGACTTCAAAGGCATCAACTTGCATCTAA 1452 0.4229 MLSPEGELKISFGYQCNSQRSIPCEAAKGYNILPEVHRTSSFSCLSGAALSANATLANTNICNGLLGEEILPTWDSPNSFRKVPSSPNLSRLDILSSSLQSNFSNLSCSPPTPSDLLDYDSCTLKCMSAPSKSEGFFNAMEVQAAGGAAGEDRVQAVCSEENGWLFCAVYDGFNGRDAADFLAGTVYDTIISNFNALYWGFEPDSNQASNDVGLGGSYKLDDTLMVHQEQSLSKLEGNNNSYLGCLAKSDLSAKEMEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSKTVLATCNTRGKLQAIQLTESHTVDNDVERARLLADHPDDPKAIIGGKVKGKLKVTRALGVGYLKKKCLNDALMGILRVRDLISPPYVSSQPSLNVHKISNSDQFVIVGSDGLFDFFSNDEAVELVESYILSNPFGDPAKFLIEQLVARAAISAGFSMEELMNVPAGRRRRYHDDVTVIVIILGTSHRTSKASTCI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00106 483 CDD PP2Cc 149 470 IPR001932 -
Accr12g00106 483 Gene3D - 118 479 IPR036457 -
Accr12g00106 483 SMART PP2C_4 127 468 IPR001932 -
Accr12g00106 483 ProSiteProfiles PPM-type phosphatase domain profile. 136 470 IPR001932 -
Accr12g00106 483 Pfam Protein phosphatase 2C 228 426 IPR001932 -
Accr12g00106 483 PANTHER PROTEIN PHOSPHATASE 2C 129 468 IPR015655 GO:0004722|GO:0006470
Accr12g00106 483 SUPERFAMILY PP2C-like 149 471 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00106 Accr-Chr12 1133382 1135266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00106 4 483 PP2C-type Phosphatase Gene Family AT3G16560 62.000 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00106 - - gmx:100808304 739.954