Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00105 ATGCTTAGTCCTGAAGGAGAACTTAAAATTAGTTTTGGCTATCAATGCAATAGCCAAAGAAGTATACCTTGTGAGGCTGCGAAAGGCTATAACATTCTACCCGAAGTTCACAGAACAAGCAGTTTCTCCTGCTTGTCTGGTGCAGCCTTGAGTGCAAATGCTACGTTAGCCAACACAAACATCTGCAATGGTCTGCTAGGAGAAGAAATACTTCCAACTTGGGACTCACCCAATTCATTCCGTAAGGTACCCTCTTCTCCAAATCTTTCAAGGTTGGATATATTATCATCTTCTCTCCAGAGTAATTTCTCAAACTTAAGTTGCAGTCCACCAACTCCAAGCGATTTGCTTGATTATGACTCTTGTACATTAAAATGCATGAGTGCTCCTTCCAAGAGTGAAGGTTTTTTTAATGCCATGGAAGTCCAAGCTGCAGGGGGAGCTGCTGGCGAAGATAGAGTTCAAGCTGTTTGTTCTGAAGAAAACGGTTGGCTCTTTTGTGCAGTTTATGACGGCTTTAATGGAAGAGATGCTGCCGACTTTCTGGCCGGTACTGTGTATGACACAATTATATCTAACTTTAATGCATTGTATTGGGGATTTGAGCCAGATTCCAATCAAGCTTCTAATGATGTGGGTTTGGGTGGATCCTATAAGTTGGATGATACTCTCATGGTTCATCAGGAGCAATCTCTGTCAAAACTTGAGGGAAACAACAATTCTTATCTTGGCTGTTTGGCAAAGAGTGACCTATCTGCTAAGGTAGGAGCGCCATATAAATCATTTTCAGATGGGGTACTTGATAGCCTTGAACGCTCTCTTAGTCAGGTGGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGGCCTGATTTAGTTTCTGTTGGATCTTGTGTTTTGCTTGTGCTTCTTCATGGGAATGACTTGTACACACTTAATTTAGGTGACAGCAAAACTGTATTAGCAACATGTAACACAAGAGGCAAACTTCAAGCTATCCAGCTTACAGAAAGCCATACCGTTGACAATGATGTTGAAAGAGCTCGACTCCTGGCTGATCACCCAGATGATCCTAAAGCCATTATAGGAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCGTTAGGAGTAGGTTACTTGAAAAAGAAATGTCTGAATGATGCGCTGATGGGAATCCTTCGAGTTCGAGATCTTATAAGCCCTCCATATGTTTCCTCTCAACCATCACTGAATGTGCATAAGATCTCAAACTCTGATCAATTTGTGATTGTAGGAAGTGATGGCTTATTTGACTTCTTCAGTAATGATGAGGCTGTGGAGCTTGTTGAGTCTTATATCTTAAGCAATCCATTTGGTGATCCAGCTAAGTTTCTTATCGAGCAGCTTGTAGCAAGAGCAGCCATTTCCGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCCGCCGGGAGGAGGAGGAGGTATCATGATGACGTGACCGTGATTGTGATAATTCTTGGGACGAGTCATCGGACTTCAAAGGCATCAACTTGCATCTAA 1551 0.4236 MLSPEGELKISFGYQCNSQRSIPCEAAKGYNILPEVHRTSSFSCLSGAALSANATLANTNICNGLLGEEILPTWDSPNSFRKVPSSPNLSRLDILSSSLQSNFSNLSCSPPTPSDLLDYDSCTLKCMSAPSKSEGFFNAMEVQAAGGAAGEDRVQAVCSEENGWLFCAVYDGFNGRDAADFLAGTVYDTIISNFNALYWGFEPDSNQASNDVGLGGSYKLDDTLMVHQEQSLSKLEGNNNSYLGCLAKSDLSAKVGAPYKSFSDGVLDSLERSLSQVENDFLYMVEQEMEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSKTVLATCNTRGKLQAIQLTESHTVDNDVERARLLADHPDDPKAIIGGKVKGKLKVTRALGVGYLKKKCLNDALMGILRVRDLISPPYVSSQPSLNVHKISNSDQFVIVGSDGLFDFFSNDEAVELVESYILSNPFGDPAKFLIEQLVARAAISAGFSMEELMNVPAGRRRRYHDDVTVIVIILGTSHRTSKASTCI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00105 516 CDD PP2Cc 149 503 IPR001932 -
Accr12g00105 516 SUPERFAMILY PP2C-like 149 504 IPR036457 -
Accr12g00105 516 PANTHER PROTEIN PHOSPHATASE 2C 130 501 IPR015655 GO:0004722|GO:0006470
Accr12g00105 516 SMART PP2C_4 127 501 IPR001932 -
Accr12g00105 516 Pfam Protein phosphatase 2C 280 459 IPR001932 -
Accr12g00105 516 Gene3D - 119 512 IPR036457 -
Accr12g00105 516 ProSiteProfiles PPM-type phosphatase domain profile. 136 503 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00105 Accr-Chr12 1133382 1135266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00105 4 516 PP2C-type Phosphatase Gene Family AT3G16560 62.813 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00105 - - gmx:100808304 796.578