Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00096 ATGAACCCTCTATACCCTAAACCTCGATCCTATGCACCACAAATGGAGATGACGATTCCCCCCTCTCAGCTTTCCGACAACGATCGGAGCAGCTCCGAACTGCGAGCTCTCGATTGCAACCTCACTTCGCTTTGCGACCATATCCAGATGGAAGGCTTCAATTCCGGCTCATTCTCCGACATCGTGCTCCATGCAATGGGTTCCACTTATCACCTCCATCGCCTTATCCTTTCTCGGAGTTCTTACTTCAGAAATATGCTTCATGGTCCCTGGAAAGAAGCCGGTGCTCCTATTGTCACCCTGCATGTTGATGATAAGAATGTTAATGATGAGGCAATCACAATGGCTTTGGCTTATCTCTACGGGCACCACCCTAAGCTTAGTGATAGTAATGCATTTCGTGTTCTTGCTGCAGCATCCTTTCTTGACCTCCAGGACTTATGTGCAATATGTACAGACTTCATCATATCTGAGCTGTGGACTTCAAATTTCTTGGCTTATCAGGTTTTTGCAGAAAACCAAGACTATGGCATTCATGGGGAGCGTGTAAGAAATGCTTGTTGGGGCTACCTCTGTCAAAGTGGTGGCATGGAGTTGAAGGAGGTGCTTCCGAAACTTTCTTCTCAAACTTTACATGCATTACTGACCTCTGATGAACTGTGGATACCAAGTGAAGAGAAACGGTTTGAATTGGCACTACACACGTTCCTGGCAAAAAATGCTCACTGGAAAGCTGAGCATCCTGAGCAAGGGAGTTCTGGTTCTGAGTCTGCAACTTGTACTCATTCTGATTCTGATAATATTAAGGGAAAAAGTGGAGCTGACAGCATCACAAGTAATAGGTTGGGGACTGATATAGAGTGTCTGAATATTAAAAGTGATGTAAAGGACATCATTGATCATAATCTGCGAGATGAGCTTGCAGACAGTGTGGAACACCTCAACAATGAGGGTTCTGATTCTAATCAACTGGCACAAGCAACATCGTTTGCTGGTTCATCAAATTTGGAACCTAGATATGCTTGCAACATGGAAGGGCCTTCGTCAATCAGTAATTTGGTGTTAGAAAAAGATGGGATCAGAACATCATGTTGTTATGTTGAGATGCCTCCCAGTGCTGGTGCAACTGGAGTGGCTATTGAAGGGCCATCTGAGGAAGGGTCAAATTCTTCCTGCAATGGCCTCACATCCAGTGATTGGGGAAGATACAATGTGCCTCTTTTTCCATGGGGCAGCCGGGTAGTTGGTGGAAGACGGCTTAAAGCTCACTCCAAAGGAAATTATGGAATTCATGGGGATGAACATGAAGCATTTGTAAATATATTTGAAGGAGGTTCTCTTTTATATTGCAATATGTCTTTTGAGGCGCTTCTGAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGCCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTGCAAGAAATTGCTGCTGATACATGCAAAACTTGTTGCCTTGCAAGTGCAGCATGCACTTGCAGGCAGCCATTTGCATTTTCTCAGGGAGTTTCCACACCTAGTTACTACATGCAAGAACACAACCCGAGTAATAATTCAGGGAACACGAGAAACATATATGTTGCTGAGTCCTCTCAAAGTGAAGGAAGTGGCATATTTAGACCTGTACGTGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATCGGTAGAGGAACTACATTTGTGCCAACATCTGCTTCACCTCCTACACGTTTTGTCTTCTCTCGTGTGCCATTTGGTGTTGGCAACAGAAACTACCCACAATCTGCAGCTAATGATGAGTCAGAGGCACAAGCTGACCACAACGGAGACATGTCTGGAGATGGGTTGACAGCTTTGGTTGGACTAAGCCAGGGAGGGAGTAGTGGAGTCAATGCACATGGAGAAATGGCACAAAGGGGATATGAGACTGGCTTGAGAAGCAAGATCTCTGGAATTGCTGCTGGAGGCCCAAGTACTGGTGGCATTCCCATGCAATTGTTAGAGGCACCAGAACATACCATAGGAATAGAATGGGAGAATACCAGTAGTTCTTCCATATCGTTGGATTTGAAAACACCTTTGACCCATTTTCCCCCATTTCGATTTGGAGTGCAATTTGAGGATGTGCACAGACTTGGTGATGGTCAGGTGAAGCACTCTCCAGAAGTGTTCTATGCTGGTTCTCTGTGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCCCAGGGACGGAGAACCGTCGGGCTGTTTCTTCACCGTCGGAAAGCAGAGATTGCTGATTTACATAGAAAGGTGCACGTGTATGTGGATTCTCGTGAAAAGGTGACTGCTCGCTATCAGTTGATATGCCCATCAAAAAGGGAAGTGATGGTGTTCGGAAGCTTTAAACAAACGGGCACTCTTCTACCTAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGCTGTTTGACGAGCTTGCGGATCTTCTGCAGAATGGGGCCCTTCGAATAATTGCCGTGGTGCAGCTCGTTTAG 2550 0.4565 MNPLYPKPRSYAPQMEMTIPPSQLSDNDRSSSELRALDCNLTSLCDHIQMEGFNSGSFSDIVLHAMGSTYHLHRLILSRSSYFRNMLHGPWKEAGAPIVTLHVDDKNVNDEAITMALAYLYGHHPKLSDSNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHALLTSDELWIPSEEKRFELALHTFLAKNAHWKAEHPEQGSSGSESATCTHSDSDNIKGKSGADSITSNRLGTDIECLNIKSDVKDIIDHNLRDELADSVEHLNNEGSDSNQLAQATSFAGSSNLEPRYACNMEGPSSISNLVLEKDGIRTSCCYVEMPPSAGATGVAIEGPSEEGSNSSCNGLTSSDWGRYNVPLFPWGSRVVGGRRLKAHSKGNYGIHGDEHEAFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKTCCLASAACTCRQPFAFSQGVSTPSYYMQEHNPSNNSGNTRNIYVAESSQSEGSGIFRPVRVHVRGAIDGLAGIGRGTTFVPTSASPPTRFVFSRVPFGVGNRNYPQSAANDESEAQADHNGDMSGDGLTALVGLSQGGSSGVNAHGEMAQRGYETGLRSKISGIAAGGPSTGGIPMQLLEAPEHTIGIEWENTSSSSISLDLKTPLTHFPPFRFGVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTVGLFLHRRKAEIADLHRKVHVYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRIIAVVQLV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00096 849 ProSiteProfiles BTB domain profile. 59 129 IPR000210 GO:0005515
Accr12g00096 849 MobiDBLite consensus disorder prediction 250 276 - -
Accr12g00096 849 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 13 849 - -
Accr12g00096 849 SMART BTB_4 59 159 IPR000210 GO:0005515
Accr12g00096 849 MobiDBLite consensus disorder prediction 1 31 - -
Accr12g00096 849 MobiDBLite consensus disorder prediction 245 276 - -
Accr12g00096 849 MobiDBLite consensus disorder prediction 602 624 - -
Accr12g00096 849 Gene3D Potassium Channel Kv1.1; Chain A 25 192 IPR011333 -
Accr12g00096 849 Pfam BTB/POZ domain 53 157 IPR000210 GO:0005515
Accr12g00096 849 SUPERFAMILY POZ domain 53 157 IPR011333 -
Accr12g00096 849 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00096 Accr-Chr12 1075109 1080258 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr12g00096 BTB 1.8e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00096 - - qsa:O6P43_003564 1348.18