Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00079 ATGGCAGTAACGTCAACACAATATGACAGATTCTCAATGGATTTTGTGATGGGAGGTGCGGCAGCTATTATATCTAAGAGTGCGGCAGCACCAATAGAGAGAGTCAAGCTTTTATTGCAAAATCAAGGGGAAATGATAAAGAGAGGACAACTCAAAAGACCATATTTGGGTGTATCTGATTGCTTTAAGAGGGTCTTGCAGGAGGAGGGTCTGTTTGCCTTTTGGAGAGGGAACCAAGCCAATGTTATACGATACTTCCCAACTCAAGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGCATTCCAAAGAGAGAGACGGGTATATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGCAGTGCTGCGGGAGCTACTACTTCACTACTGCTATATCATTTAGACTATGCTCGTACACGATTGGGTACAGATGCATTAGAAGGCCATGTCGGTGGCCAGCGGCAGTTTAAAGGGCTAGTTGATGTATATCGTAAAACCTTATCAAGCGATGGAATTGGTGGCTTGTACAGAGGATTTGGAGTTTCAATAATGGGAATCACCATGTATCGAGGCATGTACTTTGGGATCTATGACACCATGAAACCTCTTGTCTTAGTTGGGCCTTATGAGGGTAATTTTTTGGCTTGTTTCGTGTTGGGTTGGAGCATCACGTCCTTTGCTGGGGTTTGCGCCTACCCTTTTGACACACTTCGTCGGAGAATGATGTTGACGTCTGGACAGCCAAATAAGTATCGTAATGCATTGCATGCGTTTCGTGAGATTGTTCGACATGAGGGTTTCTGTGCTCTATTTCGGGGAGTCACTGCAAATATGCTTCTTGGCGTCGCTGGAGCTGGGGTGCTCGCAGGATATGATCAGCTGCACCTAATCTCATCAAGACACGGTCTCTATAATGAGCCCAAACAGTGA 939 0.4473 MAVTSTQYDRFSMDFVMGGAAAIISKSAAAPIERVKLLLQNQGEMIKRGQLKRPYLGVSDCFKRVLQEEGLFAFWRGNQANVIRYFPTQAFNFAFKGYFKSIFGHSKERDGYIKWFAGNVASGSAAGATTSLLLYHLDYARTRLGTDALEGHVGGQRQFKGLVDVYRKTLSSDGIGGLYRGFGVSIMGITMYRGMYFGIYDTMKPLVLVGPYEGNFLACFVLGWSITSFAGVCAYPFDTLRRRMMLTSGQPNKYRNALHAFREIVRHEGFCALFRGVTANMLLGVAGAGVLAGYDQLHLISSRHGLYNEPKQ 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00079 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 102 IPR018108 -
Accr12g00079 312 Pfam Mitochondrial carrier protein 215 297 IPR018108 -
Accr12g00079 312 Pfam Mitochondrial carrier protein 115 207 IPR018108 -
Accr12g00079 312 Pfam Mitochondrial carrier protein 11 105 IPR018108 -
Accr12g00079 312 Gene3D Mitochondrial carrier domain 12 304 IPR023395 -
Accr12g00079 312 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 10 304 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Accr12g00079 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 206 IPR018108 -
Accr12g00079 312 SUPERFAMILY Mitochondrial carrier 10 297 IPR023395 -
Accr12g00079 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 300 IPR018108 -
Accr12g00079 312 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085
Accr12g00079 312 PRINTS Mitochondrial carrier protein signature 27 41 IPR002067 GO:0055085
Accr12g00079 312 PRINTS Mitochondrial carrier protein signature 14 27 IPR002067 GO:0055085
Accr12g00079 312 PRINTS Mitochondrial carrier protein signature 179 197 IPR002067 GO:0055085
Accr12g00079 312 PRINTS Mitochondrial carrier protein signature 77 97 IPR002067 GO:0055085
Accr12g00079 312 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085
Accr12g00079 312 PRINTS Adenine nucleotide translocator signature 11 23 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Accr12g00079 312 PRINTS Adenine nucleotide translocator signature 55 76 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Accr12g00079 312 PRINTS Adenine nucleotide translocator signature 114 127 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Accr12g00079 312 PRINTS Adenine nucleotide translocator signature 219 235 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Accr12g00079 312 PRINTS Adenine nucleotide translocator signature 88 100 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Accr12g00079 312 FunFam ADP,ATP carrier protein ER-ANT1 12 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00079 Accr-Chr12 861828 863514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00079 9 304 Antiporters AT5G17400 80.068 1.31e-171 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00079 K05863 - gmx:100798418 506.908