Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00075 ATGGGCCTTCTCAGGGTTCGGATCAAGCGCGGAGTGAACCTCGCCGTTCGTGATGTTCGTAGCAGCGATCCTTACGTCGTCGTAAGGATGGGCACACAGAAACTCAAGACTCGGGTGATAAAGAAATGCGTGAATCCAGAGTGGAACGAAGAGCTGACGCTTGCAGCGACAGAGCCTGATCATCCTATAAAATTGACAGTGTATGACCATGACACGTTTAGCAAAGATGACAAGATGGGGGATGCAGAGTTTGAGATAAGGCCGTTCATAGAAGCGGCGAATATGAGGCTGGAAGGGCTGCCGAGTGGGACGGTGGTGAGAAGAGTGCATCCAGACACGCAAAACTGTTTGGCGGATGAGAGTTGCATTACGTACAGAGAGGGCAGGATTATGCAGGATTTGGTGCTCAGATTGCGCAACGTTGAATGTGGTGAGCTTGAAGTCCAATTGGAATGGATCCGACCTCCTTCTACCTCCGATTCTATGTAG 489 0.5051 MGLLRVRIKRGVNLAVRDVRSSDPYVVVRMGTQKLKTRVIKKCVNPEWNEELTLAATEPDHPIKLTVYDHDTFSKDDKMGDAEFEIRPFIEAANMRLEGLPSGTVVRRVHPDTQNCLADESCITYREGRIMQDLVLRLRNVECGELEVQLEWIRPPSTSDSM 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00075 162 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 156 IPR044562 -
Accr12g00075 162 CDD C2_ArfGAP 2 144 - -
Accr12g00075 162 Pfam C2 domain 2 88 IPR000008 -
Accr12g00075 162 SMART C2_3c 3 98 IPR000008 -
Accr12g00075 162 Gene3D C2 domain 1 162 IPR035892 -
Accr12g00075 162 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 127 IPR035892 -
Accr12g00075 162 ProSiteProfiles C2 domain profile. 1 99 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00075 Accr-Chr12 832457 833364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00075 34 157 C2H2 Transcription Factor Family AT1G70790 55.556 7.39e-48 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00075 - - qlo:115962561 251.521