Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00071 ATGTGGATGTTGGGACATAACGATGGTGGTGAGGTTGCCATGGCTGATCACTCATTCAATGGAAGAAAGCTCAGGCCTCTCATTCCGTGGCCAGTGACTTCTTCCAATAATACCTCAACTACAGCTCCTCCTTGCCTGAGAAGTATTCACGGCTCCGATTTGTTTACACAATATCACGATCTGATACCATCAACGACGGATCAGAGTAAGAAAGAGTTCAATAGTTCACCAGTTTTGGTGAGCTCAAGGTGGAATCCTACTCCAGAGCAGCTAAGAGCCCTTGAAGAGTTGTATCGGCGAGGAACAAGAACACCATCTGCTGAGGAAATTCAACATATCACTTCACAGCTGCGAGTATTCGGTAAAATTGAAGGGAAGAATGTTTTCTACTGGTTTCAGAATCATAAAGCCAGAGAGAGGCAGAAACGACGCCGTCAGACGGAATCAGCTCCCCGTGATTTTGATAGTCTAGAGAAGGAAGGCTTAGGCGTAGGTAAGACAGTGTTTGAAGTTGAACAGACCCATAACTGGGCACCCTCTACAAACTGCAGTACACTTGCAGAGGAATCTGTCTCATTACCAAGAGCAGGGACAACAAAAGCAGTGGTGGCAGAGCGAAGGACGATGGACGGATGGATCCAAATCGATGAAGCGGAATTACAGCAGAGAAAAAACTTGATTGAAAGGAATGCCACGTGGAGGATGATGCAGCCACCTTGTCCTCTTATTCATCCTGCAGATTCCACCCACCTCATAAACACATGTACAGCTAGTTTAATTGCCTCCACAAGCATGGCAACAGCGAGAGAAATTGACGCAAAGCTCATTAAGGCATATGATCTCAGCTTCTTTATATCGCCTCACAGTGAAAGCACGGTCATCAGTGACGACCAAGTTGAACCTGAAACCCTAGAACTATTCCCTCTTAGGAGTGGGGAAGGCAGTGATAACGTCAACCCTAAAGGGAGTGAGATTTCAGTTTCTGCAATGAATGACAATAACTTTACCCCAAGCCAGTTCTTTGAGTTCCTTCCATTGAAAAACTAG 1047 0.4565 MWMLGHNDGGEVAMADHSFNGRKLRPLIPWPVTSSNNTSTTAPPCLRSIHGSDLFTQYHDLIPSTTDQSKKEFNSSPVLVSSRWNPTPEQLRALEELYRRGTRTPSAEEIQHITSQLRVFGKIEGKNVFYWFQNHKARERQKRRRQTESAPRDFDSLEKEGLGVGKTVFEVEQTHNWAPSTNCSTLAEESVSLPRAGTTKAVVAERRTMDGWIQIDEAELQQRKNLIERNATWRMMQPPCPLIHPADSTHLINTCTASLIASTSMATAREIDAKLIKAYDLSFFISPHSESTVISDDQVEPETLELFPLRSGEGSDNVNPKGSEISVSAMNDNNFTPSQFFEFLPLKN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00071 348 FunFam WUSCHEL-related homeobox 4 81 148 - -
Accr12g00071 348 SUPERFAMILY Homeodomain-like 82 147 IPR009057 -
Accr12g00071 348 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 68 343 IPR044555 GO:0003700|GO:0099402
Accr12g00071 348 CDD homeodomain 83 143 IPR001356 GO:0003677
Accr12g00071 348 Gene3D - 79 142 - -
Accr12g00071 348 ProSiteProfiles 'Homeobox' domain profile. 87 142 IPR001356 GO:0003677
Accr12g00071 348 SMART HOX_1 79 146 IPR001356 GO:0003677
Accr12g00071 348 Pfam Homeodomain 82 141 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00071 Accr-Chr12 782129 784228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00071 1 348 Wox Gene Family AT3G18010 35.279 2.28e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Accr12g00071 Homeodomain 1.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00071 - - gmx:100777274 422.165