Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00066 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAATCGATCAGAAGATGCAGCAGGATCTACTTCTTCAAAAGGGCACAAGTCCAATGATGGTTCATTCCCTAAGAAGCAAAGTTCTGAGCATAAACCCTTTCCAGGGATTTCGAGCTGGTTGCACTCTGTTGCTAACAAGCAGAGCCCAAGTCCTCCATCTTCGAATCTGGAAAGAGGAGAAAGAGTGGAACCATCTGATTTAGTTAGCAGTGGCGGTTTAGATATTGTTTTGGATTCAGCTAGGCGTGATTCTGGGTCTAGCAATTCGAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAATTGGCTTTAGAGATGAGTGCGAAGGAGGATCCAGAGGCAGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGTTCTTGTGGCCCTGATAATACACCAGCTGAAGTTTTGGCCTACAGATACTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTTGGATGGTTTCTATGATCTTTATGGGATCTTAAATGAGTCTCAGTCAAACTCTGCTAGAATGCCTTCCCTGGTAGATCTGCAAGGGACACCAACCTCAGATAGTGTCACTTGGGAAGCAGTCTTGGTCAATAGGGCTGCTGATTCAAATTTGTTGAAACTTGAGCAAAAAGCGCTAGAGTTGGCTGTCAAGTCAATACCAAATTCTGAATTAACTGTAAATAGCAGTTTGGTGCAGAGGCTTGCCATACTAGTGGCTGACTATATGGGTGGACCGGTTACAGATCCTGAAAGCATGACAAGAGCATGGAGAAGTCTTAGTTACAGTCTGAAAGCAACTCTTGGTAGCATGGTTTTGCCTCTTGGTTCTCTGACCATTGGATTGGCTCGGCATCGTGCATTGTTTTTTAAGGTTTTATGTGATAGTGTGGGCATCCCATGCTGCTTGGTCAAAGGAATACATTATACAGGTTCTGATGATGTGGCCATGAACTTTGTCAAAATTGACGATGGAAGGAAATACATTGTTGACCTGATGGCAGATCCTGGAACACTTATTCCATCTGATGCAACTGGATTGCATGGCGAGTATGATGAAACTCTTTTTGTGGCTAGTCCTTTATCGAGGGACCTTGATTCCTCTCGCATAGCGTCATCCAGCAGTGGGATAGGAAGTTCATCTGAAGAAGCTTCAGAGTCAAGTACATTTGATAAAAGAAGCATATCAAAACAGATTGCCTATTTGGGCAAAGAATCTTATGTAAGCAATCCCACTACAAGTGAAGACGAATCAAAGAGCCCATTGAATGATTTTGGATGTCCCCCTAATATGGAAAAGTTCACCATGCAGGAAGCTCCTGGTAGACCAAATCATCCCCACGTTCATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGCACGTAGAATGAAAGTGAAAGATGTTTCACAATATATGATTGATGCTGCAAAGGGGAATCCTCAGTTAGCTCAAAAACTTCATGATGTTTTACTTGAAAGTGGTGTTGCTCCTCCTCCAAACTTATTTTCTGAAACTTATCATCAGCAGTTGGGTGGTACCTTTGTTGAGACTAATTCCAACACGGAGGAAAATGAATATAAACATGAGAGTGGGAACAAGGAAACTCAGGCTGATTGCCACCGAAGTCCTGCTCAACTCTTGCCTCCTTTGCCTCCTTACAGAGCTCATCTTAAAGCAATTCCGAGCAGTCAGATGGTGCGTTCCAAGCCTGTAGAAGGTTTAGGGATCAACCTTCCTTTTGATAGTAGGGAAGCAGCTGGACAGCACTTGCAATCACATGCAGAAGCAACTCCTATAAGATACGGGAAAAATGTACCAGTTGCTGCTGCTGCAGCAGCCGCAGCAGCTGTTGTTGCTTCATCAGTGGTAGTTGCTGTGGCCAAGTCAAGTACTGACTCAAATATTGAGCTTCCCGTTGCTGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTTGCAACCACTGCGGCTGTTAGTAAACAATATGATCAGGGAAGTCGAAGTGATGGAGATTCCGATGGTGGCTTTTATGAGCAGAAGGGTAGTGATTATGGGGAACATAATGTTTTAGGAGCAAACTCAGAAGGTGAGAGAATATCTGACGGGTCAATAGGTAATGATAGCGCAAAATCTGATTCTGTACTAGATGATGTTGCTGAGTATGAAATTCCATGGGAGGATATCACACTGGGTGAACGTATTGGGCTTGGATCATACGGGGAGGTGTACCGGGGTGAATGGCATGGAACTGAAGTAGCTGTAAAGAGATTTTTGGATCAAGACATCTATGGTGAATCTCTTGAGGAATTCATAAGTGAGGTCCGAATAATGAAAAGGCTCAGGCATCCAAATGTTGTTCTCTTTATGGGAGCTGTAACCAAACCTCCAAATCTTTCAATTGTTACAGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATCCACCGGCCTAACAATCAATTAGACGAGCGAAGACGGCTGAGGATGGCCCTAGATACTGCACGAGGAATGAACTATTTGCATAACTGCTCTCCAGTGATAGTCCATCGCGATTTGAAGTCTCCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGCGACTTTGGTTTATCACGAATGAAGCACAGTACATTCCTTTCTTCAAGATCAACCGCAGGAACAGCAGAGTGGATGGCTCCAGAAATGTTGAGAAATGAGCCTTCAAATGAAAAGTGTGATGTTTTCAGTTTTGGGGTCATATTATGGGAGCTCTCTACGATGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTGGTCGGTGCCGTCGGTTTCCAACATCGCCGACTCGAAATCCCAGATGATATGGACCCTGCCATCGCTGATATTATCAGAAAATGCTGGCAGACAGATCCAAGGTTGAGACCAAGCTTTGCCGAAATAATGGCAGCTCTGAAGCCATTGCAGAAGCCAATTATTAGTTCACAAGTGCAAAGATCAAGTGGAGCACATGAAAAGGCTCAGGCATCACGAATTGCTCAAAACCCAGCTGGATAG 3087 0.4396 MKNILKKLHIMSNRSEDAAGSTSSKGHKSNDGSFPKKQSSEHKPFPGISSWLHSVANKQSPSPPSSNLERGERVEPSDLVSSGGLDIVLDSARRDSGSSNSRDPEVEEEYQIQLALEMSAKEDPEAVQIEAVKQISLGSCGPDNTPAEVLAYRYWNYNALGYDDKILDGFYDLYGILNESQSNSARMPSLVDLQGTPTSDSVTWEAVLVNRAADSNLLKLEQKALELAVKSIPNSELTVNSSLVQRLAILVADYMGGPVTDPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALFFKVLCDSVGIPCCLVKGIHYTGSDDVAMNFVKIDDGRKYIVDLMADPGTLIPSDATGLHGEYDETLFVASPLSRDLDSSRIASSSSGIGSSSEEASESSTFDKRSISKQIAYLGKESYVSNPTTSEDESKSPLNDFGCPPNMEKFTMQEAPGRPNHPHVHARSPSWTEGISSPAARRMKVKDVSQYMIDAAKGNPQLAQKLHDVLLESGVAPPPNLFSETYHQQLGGTFVETNSNTEENEYKHESGNKETQADCHRSPAQLLPPLPPYRAHLKAIPSSQMVRSKPVEGLGINLPFDSREAAGQHLQSHAEATPIRYGKNVPVAAAAAAAAAVVASSVVVAVAKSSTDSNIELPVAAAATATAAAVVATTAAVSKQYDQGSRSDGDSDGGFYEQKGSDYGEHNVLGANSEGERISDGSIGNDSAKSDSVLDDVAEYEIPWEDITLGERIGLGSYGEVYRGEWHGTEVAVKRFLDQDIYGESLEEFISEVRIMKRLRHPNVVLFMGAVTKPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEMLRNEPSNEKCDVFSFGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLEIPDDMDPAIADIIRKCWQTDPRLRPSFAEIMAALKPLQKPIISSQVQRSSGAHEKAQASRIAQNPAG 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00066 1028 MobiDBLite consensus disorder prediction 1005 1028 - -
Accr12g00066 1028 CDD STKc_MAP3K-like 749 995 - -
Accr12g00066 1028 MobiDBLite consensus disorder prediction 1 108 - -
Accr12g00066 1028 Gene3D Phosphorylase Kinase; domain 1 736 820 - -
Accr12g00066 1028 SMART serkin_6 743 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00066 1028 MobiDBLite consensus disorder prediction 675 705 - -
Accr12g00066 1028 MobiDBLite consensus disorder prediction 52 67 - -
Accr12g00066 1028 ProSitePatterns Protein kinases ATP-binding region signature. 749 770 IPR017441 GO:0005524
Accr12g00066 1028 Pfam Ethylene-responsive protein kinase Le-CTR1 147 352 - -
Accr12g00066 1028 MobiDBLite consensus disorder prediction 15 29 - -
Accr12g00066 1028 FunFam Serine/threonine-protein kinase isoform 1 734 821 - -
Accr12g00066 1028 Gene3D Transferase(Phosphotransferase) domain 1 822 1007 - -
Accr12g00066 1028 ProSiteProfiles Protein kinase domain profile. 743 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00066 1028 FunFam Serine/threonine-protein kinase CTR1 822 1005 - -
Accr12g00066 1028 Pfam Protein tyrosine and serine/threonine kinase 743 995 IPR001245 GO:0004672|GO:0006468
Accr12g00066 1028 MobiDBLite consensus disorder prediction 419 438 - -
Accr12g00066 1028 SUPERFAMILY Protein kinase-like (PK-like) 729 994 IPR011009 -
Accr12g00066 1028 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 107 126 IPR003903 -
Accr12g00066 1028 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 414 1004 - -
Accr12g00066 1028 MobiDBLite consensus disorder prediction 381 402 - -
Accr12g00066 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Accr12g00066 1028 MobiDBLite consensus disorder prediction 449 473 - -
Accr12g00066 1028 PRINTS Tyrosine kinase catalytic domain signature 903 913 IPR001245 GO:0004672|GO:0006468
Accr12g00066 1028 PRINTS Tyrosine kinase catalytic domain signature 817 830 IPR001245 GO:0004672|GO:0006468
Accr12g00066 1028 PRINTS Tyrosine kinase catalytic domain signature 922 944 IPR001245 GO:0004672|GO:0006468
Accr12g00066 1028 PRINTS Tyrosine kinase catalytic domain signature 966 988 IPR001245 GO:0004672|GO:0006468
Accr12g00066 1028 PRINTS Tyrosine kinase catalytic domain signature 856 874 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00066 Accr-Chr12 713878 720952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00066 1 1009 MAP Kinase Kinase Kinase AT1G73660 63.813 0.0 1169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Accr12g00066 PK_Tyr_Ser-Thr 1.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00066 - - qsa:O6P43_005170 1459.89