Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00046 ATGGATATTCCAAACCCCTCACTGCACACTCCTCCTCGTCGTCCCAATGTTTCCAAGTCTCATGCTCATCGTCCCGAAGAAAAGGTCCGCCTTATGTGCAGCTATGGCGGACGATTCGTCCCCCGCCCGCGTGACAAATGGCTCTGCTATGTCGGCGGCGACACCCGCATCATACTGCTCCACCGCCATTCTTCCCTCAGAGACCTCTCTCTCCTTCTCTCTGGGACCCTCCTCCTCCATGGCCGACCTTTCATCCTCAAGTATCTTCTTCCCGGTGAAGACCTTGACAGTCTCATATCAATAATCCACGATGAAGACCTCCAACTCATGATCCAAGAGTATGATCGCGTTATAACTTCATCATCTCCTCTCAAACCTTCGCGTCTGAGGCTGTTTTTGTTCTTTTCTGATCAGCCAGAGACTGCTACTCCAATCCATTCCCATGACGCCGAGCAAGAGACAAGGTTCGTGGACGCCACTAATGACTCTAGGATTCTCTCTCGGCTTGTGTCAGATGCCTCAGCGAAACCTGGCGGAACTCCTCTGAATGAGTATGACCATAATTTGGAGGCTTTGGGTGTGATTCAAAACAATAAAAAGATCAACAGTTTGGCTGATGTGGCGGACACATCGCCTTCTGGGTCTGTTTCCTCCATGTTTAGCCTACCTTCACTTCGGAACGATGATCATGGCAGCCGACTGAAGCAGCAACAGTGCCAGATGGAGGAATTGAACTTTACTAAGACCGATGGATGTGCCGATTCCTCTGCTGCTTTGGCACCACCAGTGATGGTCACTACTGGCCATAACATGAATGGGGTCACTTGTGACGCACTGGCTTCAGAATTAACTCCTTCTCCGTTGCAGCCTGTGTGTGCAAGAGCAAGCCACGCTTTAAGTTTGCTTTCTCCCAATTCAGTTACCATGTTTAGCCTACCTTCACTTGGGGACGATGATCATGGCAGCCGACTGAAGCAGCAACAGTGCCACATGGAGGAATTGAACTTTACTAAGACCGATGGATGTGCCGATTCCTCTGCTGCTTTGGCACCACCAGTGATGGTCACTACTGGCCATAACATGAATGGGGTCACTTGTGACGCACTGGCTTCAGAATTAATTCTTTCTCCGTTGCAGCCTGTGTGTGCAAGAGCAAGCCACGCTTTAAGTTTGCTTTCTCCCAATTCAGTTACCATGTTTAGCCTACCTTCACTTGGGGACGATGATCATGGCAGCCGACTGAAGCAGCAACAGTGCCAAATGGAGGAATTGAACTTTACTAAGACCGATGGATGTGCCGATTCCTCTGCTGCTTTGGCACCACCAGTGATGGTCACTACTGGCCATAACATGAATGGGGTCACTTGTGACGCACTGGCTTCAGAATTAACTCTTTCTCCGTTGCAGCCTGTATGTGCAAGAGCAAGCCACGCTTTAAGTTTGCTTTCTCCCAATTCAGTTACCAGTACACACACACATAATATGTTCAGTGAGAACAGAATTGCATCAAGCTGCAGTTATTTGTCACAGCCTGTTCACTTGCAAGAGCAAGCAAATATGAGGAGTGAAATATCTGATCCCAACCCTGCCATCCAGAGGGATAAAGTTGAAGAAAGTAGATACAGGTTAGCCACACAAGTGGATCAAAATCAAGAAATGGAGCAATTTGTCCAGTGCTTACAGCAGGTAGCAATCCCATGCTCCTACCCAGTTTATGCAATACTACCAGTGGTGGCTACTCATCCAACTGTGGCTTCCTCAGGGAACCCACTACTTACAGTAACACCCCAAATCGGGACTGCTTCTACAGTTTACAACAATGCCACTCCAATTGTTAACGCAGCATCAAATCCTGCATTTCTTCATCCTGCTCAATTTCACCAACACTACTATGTGGATTTCCCTCAATTCCATTATTGCCCGCTACAGTCCAATATTGCTTTTGCTCCATCTCCTCATGGTTTTGGACATCAAAGCACTGCCGTCCAAAAACAAACCAACACTCCTCTGTCTCCTCACTATCAATCCATGACCGGAGCTTTAAAGTAG 2049 0.4807 MDIPNPSLHTPPRRPNVSKSHAHRPEEKVRLMCSYGGRFVPRPRDKWLCYVGGDTRIILLHRHSSLRDLSLLLSGTLLLHGRPFILKYLLPGEDLDSLISIIHDEDLQLMIQEYDRVITSSSPLKPSRLRLFLFFSDQPETATPIHSHDAEQETRFVDATNDSRILSRLVSDASAKPGGTPLNEYDHNLEALGVIQNNKKINSLADVADTSPSGSVSSMFSLPSLRNDDHGSRLKQQQCQMEELNFTKTDGCADSSAALAPPVMVTTGHNMNGVTCDALASELTPSPLQPVCARASHALSLLSPNSVTMFSLPSLGDDDHGSRLKQQQCHMEELNFTKTDGCADSSAALAPPVMVTTGHNMNGVTCDALASELILSPLQPVCARASHALSLLSPNSVTMFSLPSLGDDDHGSRLKQQQCQMEELNFTKTDGCADSSAALAPPVMVTTGHNMNGVTCDALASELTLSPLQPVCARASHALSLLSPNSVTSTHTHNMFSENRIASSCSYLSQPVHLQEQANMRSEISDPNPAIQRDKVEESRYRLATQVDQNQEMEQFVQCLQQVAIPCSYPVYAILPVVATHPTVASSGNPLLTVTPQIGTASTVYNNATPIVNAASNPAFLHPAQFHQHYYVDFPQFHYCPLQSNIAFAPSPHGFGHQSTAVQKQTNTPLSPHYQSMTGALK 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00046 682 SUPERFAMILY CAD & PB1 domains 45 140 - -
Accr12g00046 682 Pfam PB1 domain 48 134 IPR000270 GO:0005515
Accr12g00046 682 CDD PB1_UP2 32 134 - -
Accr12g00046 682 SMART PB1_new 43 134 IPR000270 GO:0005515
Accr12g00046 682 PANTHER OS05G0427100 PROTEIN-RELATED 20 306 - -
Accr12g00046 682 MobiDBLite consensus disorder prediction 657 682 - -
Accr12g00046 682 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00046 Accr-Chr12 450453 452596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00046 16 167 MAP Kinase Kinase Kinase AT1G79570 37.255 2.99e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00046 - - cam:101514979 182.185