Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00039 ATGGCGACCAAGCGTTTCTTCGAAGGCAACTCTGATGATCAAAACCCAGATGAACCCCCTCATCAACGCTTCAGACCCACTCTCTCTTCGGTGATCGGAGAAGTGGTTATGGTCAGAAACTTGCAGAACCTTCTCTCTGGCTTGGAACCTTTGCTCAGAAGGGTGGTGAGTGAGGAGGTGGAGGGAGTGATGAGACACATGTATCCGAGATCGATGATGACGAGGTCAGCGTCGTTGAGGATACAAGCAGCAGAGGAAGCACCAAACCTACAACTAAGCTTTAAGGAAAGGCTGAGCATCCCTATTTTCACGGCAAGCAGGATACAAGACGTGAATGGCAACCCACTCCAGGTGATTCTTGTCGACAAAAGTGGCGATCGAAGTGTTCCGACGAGTGTGCCTTATCCCTTGAAGCTTGAACTTGTGGTTCTCGACGGAGATTTCCCACCGGCCGATAAGCAAGAATGGACGACCCACGAATTCAACAGCCACTTAGTGAAGGAGAGAGCGGGAAAGCGACCCTTGATCGCCGGATCGGAACTCAACATTTCCATGAGAAATGGGATTGCATGTTTGGGTGGCGACATTGAATTTACGGATAACTCTAGCTGGATCAGGAGTAGGAAGTTCAGAGTTGCTGTCAGAGTGGCTCCTGGAACCCATCAAGGTCCTAGGGTTCTTGAAGGCTTCACCGAATCTTTTGTCGTCAAGGATCATCGAGGCGAATTGTATAAGAAACACCATCCACCGATGTTGGAAGACGACGTGTGGCGGCTGGAGAAGATTGGGAAGGATGGGGCATTTCACAGGAAGTTGTCGTCAAATGGTATTAACAATGTTCAGCAGTTCCTCAAGTTGTCCGTGGTTGATCCTGCAAGACTCAAAGAGATATTGGGGATAGGGATGTCAGAGAAAATGTGGGAGGTAACATTGAAGCACGCGAGGAGCTGTAAGATGGAGAACAAGCTCTACATATACCGGCCGGGGCCTAACTGTGCCGTGTTTCTGAATCCCATCTGCCAAGTGGTTAGAGCTCACATCAATGGCCACATCCTGTATGGCACTGACCTCAAAAACATCAACAAGAGCTATCTTGAGAAGCTGGTGAGAGAAGCATACGCCAGATGGGACACCTTGGAGAAAGCAGCCCCCGAAGATTTCTTGAATGATGATGCTTCCTTGTTAACTCAAGGGGAAACAGTGGAGAGCCATCATCAAGCACCAGTGGGCAGTTATGGAGGCAGTAGTGAGTGGTCGACGTTGAATCACAATTCAACATATGCCGCCGTACAGGAGAATGGCTTTCCGTTCAGCTTCTCGGAGTCACAACCAGATGTTGATAACATGACACCATCAGGCTCTATCATTCAAGGTTATCTGCCAAGTGGCCCTAATTAA 1398 0.49 MATKRFFEGNSDDQNPDEPPHQRFRPTLSSVIGEVVMVRNLQNLLSGLEPLLRRVVSEEVEGVMRHMYPRSMMTRSASLRIQAAEEAPNLQLSFKERLSIPIFTASRIQDVNGNPLQVILVDKSGDRSVPTSVPYPLKLELVVLDGDFPPADKQEWTTHEFNSHLVKERAGKRPLIAGSELNISMRNGIACLGGDIEFTDNSSWIRSRKFRVAVRVAPGTHQGPRVLEGFTESFVVKDHRGELYKKHHPPMLEDDVWRLEKIGKDGAFHRKLSSNGINNVQQFLKLSVVDPARLKEILGIGMSEKMWEVTLKHARSCKMENKLYIYRPGPNCAVFLNPICQVVRAHINGHILYGTDLKNINKSYLEKLVREAYARWDTLEKAAPEDFLNDDASLLTQGETVESHHQAPVGSYGGSSEWSTLNHNSTYAAVQENGFPFSFSESQPDVDNMTPSGSIIQGYLPSGPN 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00039 465 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
Accr12g00039 465 MobiDBLite consensus disorder prediction 439 465 - -
Accr12g00039 465 PANTHER OS02G0177800 PROTEIN 1 425 IPR012416 GO:0005516
Accr12g00039 465 Pfam Calmodulin binding protein C-terminal domain 322 381 IPR046829 -
Accr12g00039 465 MobiDBLite consensus disorder prediction 1 24 - -
Accr12g00039 465 Pfam Calmodulin binding protein-like N-terminal domain 90 239 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00039 Accr-Chr12 412331 415247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00039 1 428 Calmodulin-binding Proteins AT2G18750 42.257 2.32e-112 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00039 - - qsa:O6P43_005112 524.242