Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00034 ATGAGTTTTGTGTTTAGATTATGCCCCTGTTTGAACAAGAGGTTCAAGGCCAACGCAGCTTCTGATTCTAGTAATCCTCAAGCAGCCAACGATGTTGTCGACACGTTTGATCTCTTCTTCGACCTCCACTCTCTGCAGCTAGCCACCAACTTCTTCTCCGAGTTGAATCAATTAGGTCATGGAGGGTTTGGTCCTGTTTACAAGGGTTTGATGCCAAATGGTCAAGAAGTAGCTGTGAAGAAGCTGGCTGTGGAATCAAGACAAGGAAATAGAGAATTTACCAATGAGGTCAAACTACTTCTGAGAATTCAGCACAAGAACTTGGTTACATTATATGGGTGTTGTGCTGAAGGACCTGAAAAGATGCTTGTTTATGAATATCTTCCAAACAAGAGTCTTGATCACTTTCTCTTCGATAAAAGAAAGTCACCATCTCTAGACTGGGCAACACGATTTAAAATAGTTACTGGTGTGGCAAGAGGACTTCTGTACCTGCATGAAGAGGCCCCGATAAGAATCATTCATAGAGACATCAAAGCCAGTAACGTTTTGCTGGACGAGAAGTTAAACGCAAAAATTTCTGACTTTGGCCTGGCAAGACTATTTCCTGCGGATGACACTCATATGCAGACATTTAAGATTTCTGGTACACATGGTTATATGGCTCCTGAATATGCAATGCGTGGATATTTGTCTGTGAAGACAGATGTTTTCAGTTATGGAATATTGGTATTAGAAATTGTTAGTGGGAGGAAAAACCATGACCGGCTACTTGGAGAGGAGGCAGATCTGTTGAACCATGCATGGAAGCTATATCAGGCAGGGAAGATAATGGATTTGATTGACCCAAGCCTAGGCAAATACAATGGTGACGAGGCAGCAATGTGCATTCAACTGGGCTTGTTGTGCTGCCAAGCAAGCATATCAGATAGACCTGATATGAATGCCGTTCATCTGATGCTGTCGAGTGATTCCTTCACTTTGCCCAGACCTAGTAAACCTGGAATTCAAGGCCGTGTAGGGCGTTGGACTACGACCTCGTCCTCTGCTTTCACCCATACTAATGCTACTAGTGCAACCAAGGCTTCTGTGGGAAGTAGTATCATAGACGACTTTTCTAGAAATTCTATCTCCACTTCTTCCTTTGATGAAGGAAGGTGA 1161 0.4315 MSFVFRLCPCLNKRFKANAASDSSNPQAANDVVDTFDLFFDLHSLQLATNFFSELNQLGHGGFGPVYKGLMPNGQEVAVKKLAVESRQGNREFTNEVKLLLRIQHKNLVTLYGCCAEGPEKMLVYEYLPNKSLDHFLFDKRKSPSLDWATRFKIVTGVARGLLYLHEEAPIRIIHRDIKASNVLLDEKLNAKISDFGLARLFPADDTHMQTFKISGTHGYMAPEYAMRGYLSVKTDVFSYGILVLEIVSGRKNHDRLLGEEADLLNHAWKLYQAGKIMDLIDPSLGKYNGDEAAMCIQLGLLCCQASISDRPDMNAVHLMLSSDSFTLPRPSKPGIQGRVGRWTTTSSSAFTHTNATSATKASVGSSIIDDFSRNSISTSSFDEGR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00034 386 FunFam Cysteine-rich receptor-like protein kinase 41 128 327 - -
Accr12g00034 386 SMART serkin_6 52 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00034 386 SUPERFAMILY Protein kinase-like (PK-like) 34 321 IPR011009 -
Accr12g00034 386 Pfam Protein tyrosine and serine/threonine kinase 55 262 IPR001245 GO:0004672|GO:0006468
Accr12g00034 386 ProSiteProfiles Protein kinase domain profile. 52 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00034 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Accr12g00034 386 Gene3D Phosphorylase Kinase; domain 1 13 127 - -
Accr12g00034 386 FunFam Cysteine-rich receptor-like protein kinase 2 17 127 - -
Accr12g00034 386 CDD STKc_IRAK 58 321 - -
Accr12g00034 386 Gene3D Transferase(Phosphotransferase) domain 1 128 327 - -
Accr12g00034 386 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 37 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00034 Accr-Chr12 346642 348740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00034 7 336 Receptor kinase-like Gene Family AT4G21410 49.128 4.84e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr12g00034 PK_Tyr_Ser-Thr 6.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00034 - - gmx:100790304 616.69