Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00033 ATGTTCACATCGAGGAAGAAAATCCACAAAGATAATGATGCTGAACCAACTGAGTTTGAAGAGTCTGTTGGACAGGCCTTTTTTGATCTGGAAAATACCAACCAGGAGCTGAAAAGTGATCTTAAAGATCTATACATAAATTCAGCAGTCCAAGTTGATGTTTCTGGGAACCGCAAGGCTGTAGTTATCCACGTTCCCTACAGATTGAGGAAAGCTTTCCGAAAGATTCATGTTAGGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGAAAGGATGTAATTTTGATTGCAACCCGCAGGATATCCAAGCCACCAAAGAAAGGATCTGCTGTACAGCGTCCTCGAAGCCGTACGCTTACTGCTGTGCATGAAGCTATGCTGGAAGATGTTGTATTGCCTGCTGAGATTGTTGGGAAGCGTGTCAGGTATCGACTTGATGGGTCCAAAATTATGAAGGTTTTCTTGGACCCAAAGGAGCGAAACAACACAGAGTACAAGCTGGATGCTTTTGCTGCAGTATACAGGAAGCTGTCAGGCAAAGATGTTGTGTTTGAGTATCCTATTACGGAAGCTTGA 576 0.434 MFTSRKKIHKDNDAEPTEFEESVGQAFFDLENTNQELKSDLKDLYINSAVQVDVSGNRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVILIATRRISKPPKKGSAVQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRYRLDGSKIMKVFLDPKERNNTEYKLDAFAAVYRKLSGKDVVFEYPITEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00033 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Accr12g00033 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Accr12g00033 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00033 Accr-Chr12 344847 346237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00033 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 80.105 7.86e-116 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00033 K02993 - cave:132184121 355.14