Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00015 ATGGGCTTCTTCAGCTGTTGCAAAAAAGATGATGATCATCAGACTCCTGATACTGGACCCTTCGTGCCAAAGCCAAGCCATCCCACTGGGATCAGTGGTTATACTGGTAGACAATTTTCAATTACCACTCCTCAAACTGTTGATGTTCAGCCCATTGCTGTCCCTCCCATTTCAGTTGATAAAATGAAGTCTCTGACTGATAATTTTAGCACAAAGTCTTTCATTGGTGAGGGGGCCTACGGTAAGGTGTATCATGGAGTATTGGAAAATGGGCGTCACGTGGCGATTAAGAAGTTAGATTCCAGCAGGCAACCAGAACATGAATTCCTTGCTCAGGTCTCAATAGTATCAAGGCTGAAGCATGAAAATGTTGTCGAGCTTCTTGGTTATTGTGTTGAAGGTGCTTTCCGAGCCCTGGGCTATGAGTATGCTCCGAAAGGAACTCTCCATGATATTCTCCACGGGCGAAAAGGTGTGAAAGGTGCACAACCAGGACCAACATTGTCATGGGCACAGAGAGTTAAAATTGCAGTGGGGGCAGCTAGAGGGCTTGAATATCTGCACGAAAAAGCAGAGACTCGTATAGTCCACCGTTATATCAAGTCTTGCAATATACTACTTTTCGAAGATGATGTGGCAAAGGTTTCTGATTTTGATTTGTCAAATCAAGCCACTGATACTTCTGTTCGTCTCCATTCCACCCGTGTTCTTGGAACCTTCGGTTATCATGCTCCTGAATATGCCATGACGGGTCAGCTCACCTCGAAGAGTGATGTCTACAGTTTTGGAGTAGTACTTCTAGAACTCTTAACAGGACGCAAACCTGTTGATCATACACTGCCACGAGGGCAGCAGAGCCTTGTCACCTGGGCAACGCCAAAACTGAGTGAAGACAAGGTGAAGCAGTGCGTGGATGTGAAATTAGAGGGAGAATACCCTCCAAAGGCAGTTGCAAAGATGGCTGCTGTAGCTGCACTGTGCGTGCAATATGAAGCAGAGTTTCGGCCAAATATGAGCATTGTAGTGAAAGCTCTACAGCCTTTGCTAAATCCTCGCCCTTCCTTTAACGCAAGGCAACCTCCCGAGTTGTAG 1092 0.4615 MGFFSCCKKDDDHQTPDTGPFVPKPSHPTGISGYTGRQFSITTPQTVDVQPIAVPPISVDKMKSLTDNFSTKSFIGEGAYGKVYHGVLENGRHVAIKKLDSSRQPEHEFLAQVSIVSRLKHENVVELLGYCVEGAFRALGYEYAPKGTLHDILHGRKGVKGAQPGPTLSWAQRVKIAVGAARGLEYLHEKAETRIVHRYIKSCNILLFEDDVAKVSDFDLSNQATDTSVRLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVKLEGEYPPKAVAKMAAVAALCVQYEAEFRPNMSIVVKALQPLLNPRPSFNARQPPEL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00015 363 Pfam Protein tyrosine and serine/threonine kinase 72 345 IPR001245 GO:0004672|GO:0006468
Accr12g00015 363 FunFam pto-interacting protein 1 145 356 - -
Accr12g00015 363 MobiDBLite consensus disorder prediction 1 29 - -
Accr12g00015 363 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00015 363 Gene3D Transferase(Phosphotransferase) domain 1 145 356 - -
Accr12g00015 363 MobiDBLite consensus disorder prediction 1 17 - -
Accr12g00015 363 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 354 - -
Accr12g00015 363 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Accr12g00015 363 SUPERFAMILY Protein kinase-like (PK-like) 46 345 IPR011009 -
Accr12g00015 363 Gene3D Phosphorylase Kinase; domain 1 35 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00015 Accr-Chr12 118102 119988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00015 48 354 Receptor kinase-like Gene Family AT3G58690 47.896 2.80e-87 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Accr12g00015 PK_Tyr_Ser-Thr 9.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00015 K13436 - gmx:547595 568.926