Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00009 ATGGGCATACTCAGACTGGGCAACTCCCAGGCGGAGAAGAAACAAGGAACGGGGCTTGCTAATTACGAAATTACTACAACTCTGGGCACTGGCAGTTTCGGAAAGGTGAAATTGGCCAAACACATCCATTCTCATCAACTCTTTGCCCTCAAGATCATCGACAAGAACAAGATCGTCCAACTCGATATCGCTCATCAGATAAAGAGGGAGATAGCCACCCTCAAGCTTCTCAAGCATCCCAACATCGTCAGATTACACGAGGTTTTGGCGAGCAAAACGAAAATTTACATGGTTTTGGAGTATGTCAATGGAGGGGAGTTGTTTGACAGAATTGCATCCAAAGGTAGGCTTAAAGAAGCAGAAGGTAGGAAACTTTTCCAACAGTTAATTGACGGTGTGAGCTACTGTCACAATAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAGAATGTACTAGTTGATGCCCAAGGCAACATAAAGATAACCGATTTTGGCCTTAGTGCTTTGCCCCAGCACATTAGGGCCGATGGGTTGCTGCATACAACCTGTGGAAGTCCCAGCTATGTTGCTCCAGAGGTCCTTGCTAATAGAGGCTACGACGGTGCAACATCAGATACATGGTCATGTGGTATCATCTTGTTTGTAATTCTAACGGGATATCTCCCTTTTGAAGATCGGAACATCGTCGTTCTCTATCAGAAGATATCTAAAGGAGATGTCCGGATACCCAAATGGCTATCACCTGGAGCCCAAAACTTGCTAAGGAGGATTCTTGACCCCAACCCTCTTACCCGGATAACCCTGGCCGGTATAAAAGGAGATGAATGGTTCAGGCAGGACCCTGTTCCCACAAATCCTGAGGACGACGGAGAGGAAGAGAAACAGAATGTGTATATCGATGATGAAGCCTTTTCAATCCATGACGCGCCACAAGAAGCAGAACAGAAGAGTCTTGAGTCCTCAACCCTTGTCAATGCATTTCAGTTGATAGCAATGTCTTCATGGTTAGACCTCTCGGGCTTTTTTGAGAAAGAGGATGTTTCCGAAAGAAAGAAGAGATTTACATCCAACCATTCAGCAAATGATCTCATCGCAAATATTGAAGACATTGGAGCAGAAATGGGATTTAGAGTCCAGAAGAAAAATGGAAAATTGAAAGTGATACAAGAGAATAAGGCGCACGGAAGTCTACGTGGCCTCTCGGTGGCAGTAGAGGTTTTTGAAATAAATCCATCCTTGCATGTGGTAGAGTTGTGTAAATCGTATGGAGACTCTTCTGTATATGGACAGTTATGCAAGAAGCTATCAGATAATTTGGCATTAGCCCCGGGCCCAGCCAGTGGAGAATCAGACGAGTGA 1359 0.4496 MGILRLGNSQAEKKQGTGLANYEITTTLGTGSFGKVKLAKHIHSHQLFALKIIDKNKIVQLDIAHQIKREIATLKLLKHPNIVRLHEVLASKTKIYMVLEYVNGGELFDRIASKGRLKEAEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDAQGNIKITDFGLSALPQHIRADGLLHTTCGSPSYVAPEVLANRGYDGATSDTWSCGIILFVILTGYLPFEDRNIVVLYQKISKGDVRIPKWLSPGAQNLLRRILDPNPLTRITLAGIKGDEWFRQDPVPTNPEDDGEEEKQNVYIDDEAFSIHDAPQEAEQKSLESSTLVNAFQLIAMSSWLDLSGFFEKEDVSERKKRFTSNHSANDLIANIEDIGAEMGFRVQKKNGKLKVIQENKAHGSLRGLSVAVEVFEINPSLHVVELCKSYGDSSVYGQLCKKLSDNLALAPGPASGESDE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00009 452 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00009 452 Gene3D Transferase(Phosphotransferase) domain 1 104 282 - -
Accr12g00009 452 FunFam Non-specific serine/threonine protein kinase 15 321 - -
Accr12g00009 452 FunFam Aurora kinase A 14 105 - -
Accr12g00009 452 FunFam Non-specific serine/threonine protein kinase 321 442 - -
Accr12g00009 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Accr12g00009 452 SUPERFAMILY Protein kinase-like (PK-like) 21 303 IPR011009 -
Accr12g00009 452 CDD CIPK_C 325 436 - -
Accr12g00009 452 Gene3D Phosphorylase Kinase; domain 1 8 103 - -
Accr12g00009 452 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Accr12g00009 452 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 424 - -
Accr12g00009 452 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00009 452 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00009 452 Gene3D Kinase associated domain 1, KA1 319 441 - -
Accr12g00009 452 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
Accr12g00009 452 Pfam NAF domain 323 380 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00009 Accr-Chr12 45664 49275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00009 85 435 CBL-interacting serine-threonine protein kinases AT3G17510 66.667 1.94e-167 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr12g00009 Pkinase 1.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00009 K07198 - qsa:O6P43_003749 652.514