Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01527 ATGGTCATCGTGCCGGAGAAGACAGCTCCCGATGCCCGATCTGACCCCTACTCCACTCCTCGTAAGAGGAAATTGAGATCCGGTGGGCCGCTGATTATGGACAGTCCAATCTCTTTACCCACTAAATGGAAATCCCCTCGACAATGTAGCAGTGAGAGCCCAAATCGCGCTGTCACCGCAAAAGAGATGATAGCTAATGAAGGTGAAATCAAATCGCATAAATCGCCGTCTAAGTCAATGCAGGATAGTTTTGCTGATAAACTGAAATGGAACCCCAGAGATGGTGAGCAAGTAAGGATAGTGAAGGAGGCATTGCATGTGTCTATGGCACCATCTACAATTGTCTGCCGTGAGGACGAGCAGAATATGGTTTTCGAGTTCTGCAAGTCATGCATCAAACATAAGAAGGCTGGGAGTATGTACATATGTGGGTGTCCCGGTACTGGAAAATCGCTATCCATGGAGAAAGTAAAAAAGCTTTTAGTCGATTGGGCTAAACAGGCAGGCTTTCTTCAGCCCGATGTCTTATCTGTGAACTGCACATCACTTGCAAATACATCTGACATTTTCAGCAAGATGCTTGGATTAAACCAACCATGGGGAAAAAAGACTTCAGCTTCTCCCTTACAACAACTTCAGAGCTTGTACTCTCAGAAGTCTTCTAGCCAAAACATGATATTGATGGTGGTTGACGAATTAGATTATCTGATCACCAAAGATAGGGCTGTGCTTCACGATCTCTTCACTCTCACCACTTTCCCATATTCTAGATGTATATTAATAGGGATATCAAATGCAATTGACCTTGCCGATCGTTTTCTTCCGAGTTTCCAATCATTGAACTGCAAGCCTATAATTGTTACATTTCGAGCGTACTCTAAAGACCAGATCCTTAGCATCCTGAAAGAAAGGCTAAGGGAAATTCCTTACACTGTGTTCCAACATCAAGCACTAGAGCTCTGTGCTCGGAAAGTTGCTGCTGCTTCTGGAGACATGCGAAAGGCTCTTTGTATTTGCAGGAGTGCAATTGAGATGCTAGAGGTAGAAATTAGAGAATCTATTGGCCTTTCAGAAATTTCATTGGAAGAGAAAGCTTCCCCTCGACAAAATATAGCTTCTGACCCTGATCATGTAAAACAACAAGAATTTGATGTTGTAAGGATTGATCATGTGGCTCTTGCCTTGTCCAAAATATATAGATCTCCTGTGGTGGATACAATACAATCTCTACCACATCATCAACAGATTATCCTTTGCTCTTCGATGAAACAGTTCCATGGAGCAAAGAAAGATACAATCCTTTGTGAGTTGTACAAATCTTACACGGGCATATGCAAATCATCACTGATTCCTCCGGCTGGAATTTTGGAATTTTCAAACATGTGCAGAGTATTGAATGATCAGGGGCTTATTAAACTAGGACCATCACGGGAGGACAAATTGAAGAGGGTGACACTAAACATAGATGAAGCTGATATTACCTTTGCATTGCAGGGAATTCGTTTCTTTAGAAACTGTCTTCAATAA 1527 0.4231 MVIVPEKTAPDARSDPYSTPRKRKLRSGGPLIMDSPISLPTKWKSPRQCSSESPNRAVTAKEMIANEGEIKSHKSPSKSMQDSFADKLKWNPRDGEQVRIVKEALHVSMAPSTIVCREDEQNMVFEFCKSCIKHKKAGSMYICGCPGTGKSLSMEKVKKLLVDWAKQAGFLQPDVLSVNCTSLANTSDIFSKMLGLNQPWGKKTSASPLQQLQSLYSQKSSSQNMILMVVDELDYLITKDRAVLHDLFTLTTFPYSRCILIGISNAIDLADRFLPSFQSLNCKPIIVTFRAYSKDQILSILKERLREIPYTVFQHQALELCARKVAAASGDMRKALCICRSAIEMLEVEIRESIGLSEISLEEKASPRQNIASDPDHVKQQEFDVVRIDHVALALSKIYRSPVVDTIQSLPHHQQIILCSSMKQFHGAKKDTILCELYKSYTGICKSSLIPPAGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTLNIDEADITFALQGIRFFRNCLQ 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01527 508 Gene3D - 407 498 IPR036388 -
Accr11g01527 508 MobiDBLite consensus disorder prediction 41 57 - -
Accr11g01527 508 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 54 506 - -
Accr11g01527 508 Pfam CDC6, C terminal winged helix domain 418 496 IPR015163 -
Accr11g01527 508 FunFam Cell division control protein 410 500 - -
Accr11g01527 508 SUPERFAMILY "Winged helix" DNA-binding domain 403 506 IPR036390 -
Accr11g01527 508 FunFam Cell division control protein 281 407 - -
Accr11g01527 508 SMART Cdc6_C_2 418 497 IPR015163 -
Accr11g01527 508 CDD AAA 120 273 - -
Accr11g01527 508 Pfam AAA domain 135 251 IPR003593 GO:0016887
Accr11g01527 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 357 IPR027417 -
Accr11g01527 508 PIRSF Cdc6 5 508 IPR016314 GO:0006270|GO:0051301
Accr11g01527 508 Gene3D - 95 281 IPR027417 -
Accr11g01527 508 FunFam Cell division control protein 95 280 - -
Accr11g01527 508 MobiDBLite consensus disorder prediction 1 57 - -
Accr11g01527 508 Gene3D - 282 406 - -
Accr11g01527 508 Pfam AAA lid domain 313 348 IPR041083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01527 Accr-Chr11 40645278 40650401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01527 13 507 Core DNA Replication Machinery Family AT2G29680 58.893 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01527 K02213 - gmx:100791200 652.899