Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01526 ATGCCGACCATTGCTGGGCGTAAGCTCGCGAAGGAAGCTCTTTCTGAGACAATGGTCATCGTGCCGGAGAAGACAGCTCCCGATGCCCGATCTGACCCCTACTCCACTCCTCGTAAGAGGAAATTGAGATCCGGTGGGCCGCTGATTATGGACAGTCCAATCTCTTTACCCACTAAATGGAAATCCCCTCGACAATGTAGCAGTGAGAGCCCAAATCGCGCTGTCACCGCAAAAGAGATGATAGCTAATGAAGGTGAAATCAAATCGCATAAATCGCCGTCTAAGTCAATGCAGGATAGTTTTGCTGATAAACTGAAATGGAACCCCAGAGATGGTGAGCAAGTAAGGATAGTGAAGGAGGCATTGCATGTGTCTATGGCACCATCTACAATTGTCTGCCGTGAGGACGAGCAGAATATGGTTTTCGAGTTCTGCAAGTCATGCATCAAACATAAGAAGGCTGGGAGTATGTACATATGTGGGTGTCCCGGTACTGGAAAATCGCTATCCATGGAGAAAGTAAAAAAGCTTTTAGTCGATTGGGCTAAACAGGCAGGCTTTCTTCAGCCCGATGTCTTATCTGTGAACTGCACATCACTTGCAAATACATCTGACATTTTCAGCAAGATGCTTGGATTAAACCAACCATGGGGAAAAAAGACTTCAGCTTCTCCCTTACAACAACTTCAGAGCTTGTACTCTCAGAAGTCTTCTAGCCAAAACATGATATTGATGGTGGTTGACGAATTAGATTATCTGATCACCAAAGATAGGGCTGTGCTTCACGATCTCTTCACTCTCACCACTTTCCCATATTCTAGATGTATATTAATAGGGATATCAAATGCAATTGACCTTGCCGATCGTTTTCTTCCGAGTTTCCAATCATTGAACTGCAAGCCTATAATTGTTACATTTCGAGCGTACTCTAAAGACCAGATCCTTAGCATCCTGAAAGAAAGGCTAAGGGAAATTCCTTACACTGTGTTCCAACATCAAGCACTAGAGCTCTGTGCTCGGAAAGTTGCTGCTGCTTCTGGAGACATGCGAAAGGCTCTTTGTATTTGCAGGAGTGCAATTGAGATGCTAGAGGTAGAAATTAGAGAATCTATTGGCCTTTCAGAAATTTCATTGGAAGAGAAAGCTTCCCCTCGACAAAATATAGCTTCTGACCCTGATCATGTAAAACAACAAGAATTTGATGTTGTAAGGATTGATCATGTGGCTCTTGCCTTGTCCAAAATATATAGATCTCCTGTGGTGGATACAATACAATCTCTACCACATCATCAACAGATTATCCTTTGCTCTTCGATGAAACAGTTCCATGGAGCAAAGAAAGATACAATCCTTTGTGAGTTGTACAAATCTTACACGGGCATATGCAAATCATCACTGATTCCTCCGGCTGGAATTTTGGAATTTTCAAACATGTGCAGAGTATTGAATGATCAGGGGCTTATTAAACTAGGACCATCACGGGAGGACAAATTGAAGAGGGTGACACTAAACATAGATGAAGCTGATATTACCTTTGCATTGCAGGGAATTCGTTTCTTTAGAAACTGTCTTCAATAA 1578 0.4271 MPTIAGRKLAKEALSETMVIVPEKTAPDARSDPYSTPRKRKLRSGGPLIMDSPISLPTKWKSPRQCSSESPNRAVTAKEMIANEGEIKSHKSPSKSMQDSFADKLKWNPRDGEQVRIVKEALHVSMAPSTIVCREDEQNMVFEFCKSCIKHKKAGSMYICGCPGTGKSLSMEKVKKLLVDWAKQAGFLQPDVLSVNCTSLANTSDIFSKMLGLNQPWGKKTSASPLQQLQSLYSQKSSSQNMILMVVDELDYLITKDRAVLHDLFTLTTFPYSRCILIGISNAIDLADRFLPSFQSLNCKPIIVTFRAYSKDQILSILKERLREIPYTVFQHQALELCARKVAAASGDMRKALCICRSAIEMLEVEIRESIGLSEISLEEKASPRQNIASDPDHVKQQEFDVVRIDHVALALSKIYRSPVVDTIQSLPHHQQIILCSSMKQFHGAKKDTILCELYKSYTGICKSSLIPPAGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTLNIDEADITFALQGIRFFRNCLQ 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01526 525 SUPERFAMILY "Winged helix" DNA-binding domain 420 523 IPR036390 -
Accr11g01526 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 374 IPR027417 -
Accr11g01526 525 FunFam Cell division control protein 298 424 - -
Accr11g01526 525 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 68 523 - -
Accr11g01526 525 Pfam AAA domain 152 268 IPR003593 GO:0016887
Accr11g01526 525 SMART Cdc6_C_2 435 514 IPR015163 -
Accr11g01526 525 CDD AAA 137 290 - -
Accr11g01526 525 FunFam Cell division control protein 112 297 - -
Accr11g01526 525 FunFam Cell division control protein 427 517 - -
Accr11g01526 525 PIRSF Cdc6 7 525 IPR016314 GO:0006270|GO:0051301
Accr11g01526 525 Gene3D - 299 423 - -
Accr11g01526 525 Pfam AAA lid domain 330 365 IPR041083 -
Accr11g01526 525 Gene3D - 424 515 IPR036388 -
Accr11g01526 525 Pfam CDC6, C terminal winged helix domain 435 513 IPR015163 -
Accr11g01526 525 Gene3D - 112 298 IPR027417 -
Accr11g01526 525 MobiDBLite consensus disorder prediction 22 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01526 Accr-Chr11 40645278 40650452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01526 1 524 Core DNA Replication Machinery Family AT2G29680 56.822 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01526 K02213 - gmx:100791200 652.899