Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01518 ATGGGCTTGCATGTTCGAATCTTTGTCATCTTGATGATAGCTTTTACAGGAACCTTTTGTACTGCAGATACTGACTTGCTTGACGTTGCAGCAATCAATAGTTTATATGTTGCTCTGGGCTCGCCGCCTCTTCAAGGTTGGAAAACCACTGGGGGGGATCCATGTGCAGAACTGTGGCAAGGCGTGTCTTGTGTCTTCTCCAACATAACTCAATTAACTCTCAGAGGCATGAATTTGGGTGGAGAGCTGGGCAGTAATTTAAATTTCCCTTCCATCATTGAAATAGATCTTAGCAACAACCGCATCAGAGGGCCTATTCCATCTGCGCTACCCCCTACTCTGAGGATCTTGTCTCTTTCAAGTAATCAGTTAAATGGAAGTGTTCCAGAAGCCCTATCCTCTCTAACACAATTGTCAGATTTAGACCTGTCAGCTAACAACTTGAGTGGTCAGCTACCCCCTTCAATGGGAAGTTTATCATTACTTTCAACATTACACATGCAGAATAATGAACTTTCTGGGTTTCTTAATGTTTTGCAAGATCTTCCTCTTCAGGATTTGAATATAGAGAACAATTTATTCTTTGGCCCAATTCCTCCTCAATTGTTGAGCATCCCAAATCTCAGGAAAGATGGAAATCCATTCAATACTACTGTCATCCCATCACCTCCTGCTGCAGCCCCAGCTCCAGTAACCATGGCCCCATCACCTGCCAAAGCCCCTTGGAATGTCGAAAATAATCCAGTTACCTTGGTTGCACCAATACCTGCAAGTTCTAGGAAATCTTTTATATCTAAGAATGTTATTTGGTTTGCCATTGCTGGGTTTTTGGTATTTATTGCGCTAGGAGTTTGTCTTTTTATGTTGTGGTGTTTAAAGAGAAGGCCAGAAAACAAAAATGCTAAAACAATGGATATGGGTTTGGACGCAATGTCATTACATAAACATCAATGCAGTGACTCTTTGGAGAAAGCATCTGGGAAATCAAGGTCTCTTGGATATGGGGAACCAAATAGAAGAACAAATATGATACCAAATGTTCAGGATGAACAGGAAATACATGTGAAGAGAGTATCAGCAAGTTCCAAATTTGCAACATTGCAGCCACCACCATCTCTTCCAATCAATCTTGGTGAAAAGGACTTAACCAAACCAGCCATACCTACCAAAGTTACTGAAAGACAAGAAGTGACACGTTCCTTGCAAGTATATACTATTGCATCACTTCAGCAGTATACAAATAGTTTTTCTCAAGAAAATCATATTGGTGAAGGCACACTAGGTGTCCTTTATCGGGCTGAGCTCCCTGATGGAAAGCAACTGGCAGTGAGGAAACTGAATGCTATTGCTTCTATAGGACATGAACAGTTTCTTCAATTTGTGACCAGTATTTCCAAAATTCAACATGCTAATATTGTGAAGCTTATGGGCTATTGTGCTGAGAATGGTCAGCAACTTCTTGTATATGATTATTTCAGCAATGGAACTCTTCATGACGCACTGTATGAAGATAATGAACTCCATGCGAAACTGTCATGGAATGCACGGATTCGGGTGGCACTTGGAGCTGCTAGAGCTTTAGAGTATCTGCATGAGAACTGCCAGCCACCTTTTGTGCTTCAAAATTTAAAATCAGCTAATGTTCTCTTGAATACTGAGCTTGAAGTATGTGTCTCTGATTGTGAATTTGGTCCTTTACTGTCTTCTGGATCTGCTGGTCAGTTGTCAGGATGCCTCCTCACTGCAAATGGTTATGGTGCGCCAGAACTTGAGTCAGGGAGTTATACAAAGCAGAGTGATGTCTTTAGTTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTGTGACAGGTCACGATCTCGTGGTGAGCAATTTCTGGTCAGATGGGCGGTTCCTCAACTACATGACATTGATGCTTTAACAAAAATGGTTGACCCCTCCTTAAATGGAGCTTATTCTATGAAGTCCTTGTCACGTTTTGCAGACATCATTTCTTCATGTCTACAGCGTGAACCAGAGTTCCGACCAGCAATGGCGGAAGTTGTGCAGGATCTCCTACGAATGATCTAG 2079 0.419 MGLHVRIFVILMIAFTGTFCTADTDLLDVAAINSLYVALGSPPLQGWKTTGGDPCAELWQGVSCVFSNITQLTLRGMNLGGELGSNLNFPSIIEIDLSNNRIRGPIPSALPPTLRILSLSSNQLNGSVPEALSSLTQLSDLDLSANNLSGQLPPSMGSLSLLSTLHMQNNELSGFLNVLQDLPLQDLNIENNLFFGPIPPQLLSIPNLRKDGNPFNTTVIPSPPAAAPAPVTMAPSPAKAPWNVENNPVTLVAPIPASSRKSFISKNVIWFAIAGFLVFIALGVCLFMLWCLKRRPENKNAKTMDMGLDAMSLHKHQCSDSLEKASGKSRSLGYGEPNRRTNMIPNVQDEQEIHVKRVSASSKFATLQPPPSLPINLGEKDLTKPAIPTKVTERQEVTRSLQVYTIASLQQYTNSFSQENHIGEGTLGVLYRAELPDGKQLAVRKLNAIASIGHEQFLQFVTSISKIQHANIVKLMGYCAENGQQLLVYDYFSNGTLHDALYEDNELHAKLSWNARIRVALGAARALEYLHENCQPPFVLQNLKSANVLLNTELEVCVSDCEFGPLLSSGSAGQLSGCLLTANGYGAPELESGSYTKQSDVFSFGVVMLELLTGRKSCDRSRSRGEQFLVRWAVPQLHDIDALTKMVDPSLNGAYSMKSLSRFADIISSCLQREPEFRPAMAEVVQDLLRMI 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01518 692 ProSiteProfiles Protein kinase domain profile. 416 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01518 692 Gene3D Phosphorylase Kinase; domain 1 380 491 - -
Accr11g01518 692 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 690 IPR046959 -
Accr11g01518 692 Pfam Leucine rich repeat 94 148 IPR001611 GO:0005515
Accr11g01518 692 Pfam Protein tyrosine and serine/threonine kinase 418 688 IPR001245 GO:0004672|GO:0006468
Accr11g01518 692 Gene3D Transferase(Phosphotransferase) domain 1 492 691 - -
Accr11g01518 692 MobiDBLite consensus disorder prediction 322 342 - -
Accr11g01518 692 SUPERFAMILY Protein kinase-like (PK-like) 395 688 IPR011009 -
Accr11g01518 692 Gene3D Ribonuclease Inhibitor 28 225 IPR032675 -
Accr11g01518 692 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 382 491 - -
Accr11g01518 692 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 492 692 - -
Accr11g01518 692 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 141 - -
Accr11g01518 692 SUPERFAMILY L domain-like 28 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01518 Accr-Chr11 40364189 40372686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01518 22 692 Strubbelig Receptor Gene Family AT4G03390 50.269 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Accr11g01518 PK_Tyr_Ser-Thr 2.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01518 - - gmx:100793423 926.391